G2287528


Basic Information

Item Value
gene id G2287528
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 642273 ~ 642542 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615710
tgttaagcactgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaattatgttaattattagaagcttctaaagccatgacataatttttctggaattttccaagttgtttaaaggcacagtcaattttgtgtttgtaaacttctgaccaactggaattgtgatacagtgaattgtaaactacctgttcactaccctccttCTCTCCGGGGATGTGCAACTCAATCCTGGGCCTAAAATCACAGAGCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615710 True 270 lncRNA 0.39 1 642273 642542

Neighbor

gene id symbol gene type direction distance location
rnmt rnmt coding upstream 25846 596762 ~ 616427 (+)
seh1l seh1l coding upstream 55114 565124 ~ 587159 (+)
psmg2 psmg2 coding upstream 160116 476232 ~ 482157 (+)
spire1a LOC106589129 coding upstream 292745 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 402705 233676 ~ 240640 (+)
rims2b LOC106570772 coding downstream 96079 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 293780 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 638391 1280933 ~ 1361298 (+)
LOC110511936 spire1 coding downstream 957808 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 1069013 1711555 ~ 1825118 (+)
G2287501 NA non-coding upstream 65152 576416 ~ 577121 (+)
G2287482 NA non-coding upstream 67151 557905 ~ 575122 (+)
G2287473 NA non-coding upstream 93023 499394 ~ 549250 (+)
G2287469 NA non-coding upstream 155668 485396 ~ 486605 (+)
G2287529 NA non-coding downstream 3685 646227 ~ 647493 (+)
G2287532 NA non-coding downstream 7564 650106 ~ 650366 (+)
G2287538 NA non-coding downstream 46807 689349 ~ 689598 (+)
G2287539 NA non-coding downstream 47499 690041 ~ 690241 (+)
G2287542 NA non-coding downstream 54070 696612 ~ 696875 (+)
G2287470 NA other upstream 154612 486793 ~ 487661 (+)
G2287973 NA other downstream 630832 1273374 ~ 1274170 (+)
triqk triqk other downstream 1566580 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1679332 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1737905 2380447 ~ 2381395 (+)
G2289325 NA other downstream 2417900 3060442 ~ 3060779 (+)

Expression


Co-expression Network