G2287543


Basic Information

Item Value
gene id G2287543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 698236 ~ 698502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615725
ctcctctgtaaactggtcatctccgTATTCCTGTCGCAAGACCTACTGGTTGATGCTtgtttataaaaccctcttaggcctcactctcccctatctgagatatctactgcagccctcatcctccacatacaacacctgttctgccagtcacattctgttaaagatccccaaagcacacacatccctgggtcgctcctcttttcagttcgctgtagctagcgactggaaggagctgcaacaaacactcaaactggacagttttatctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615725 True 267 lncRNA 0.48 1 698236 698502

Neighbor

gene id symbol gene type direction distance location
rnmt rnmt coding upstream 81809 596762 ~ 616427 (+)
seh1l seh1l coding upstream 111077 565124 ~ 587159 (+)
psmg2 psmg2 coding upstream 216079 476232 ~ 482157 (+)
spire1a LOC106589129 coding upstream 348708 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 458668 233676 ~ 240640 (+)
rims2b LOC106570772 coding downstream 40119 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 237820 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 582431 1280933 ~ 1361298 (+)
LOC110511936 spire1 coding downstream 901848 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 1013053 1711555 ~ 1825118 (+)
G2287542 NA non-coding upstream 1361 696612 ~ 696875 (+)
G2287539 NA non-coding upstream 7995 690041 ~ 690241 (+)
G2287538 NA non-coding upstream 8638 689349 ~ 689598 (+)
G2287532 NA non-coding upstream 47870 650106 ~ 650366 (+)
G2287529 NA non-coding upstream 50743 646227 ~ 647493 (+)
G2287545 NA non-coding downstream 7951 706453 ~ 707885 (+)
G2287547 NA non-coding downstream 11003 709505 ~ 713676 (+)
G2287548 NA non-coding downstream 22203 720705 ~ 722692 (+)
G2287597 NA non-coding downstream 118730 817232 ~ 832842 (+)
G2287845 NA non-coding downstream 272580 971082 ~ 971496 (+)
G2287470 NA other upstream 210575 486793 ~ 487661 (+)
G2287973 NA other downstream 574872 1273374 ~ 1274170 (+)
triqk triqk other downstream 1510620 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1623372 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1681945 2380447 ~ 2381395 (+)
G2289325 NA other downstream 2361940 3060442 ~ 3060779 (+)

Expression


Co-expression Network