G2287597


Basic Information

Item Value
gene id G2287597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 817232 ~ 832842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615790
tgtcttataccatggttgtattactgtctgtcttataccatggttgtattactgtcttaaACCATGGTTGTATTGCTGTCTGttttataccatggttgtattactgtcttataccatggttgtattactgtctgtctaataccatggttgtattactgtctgtcttatagcatggttgtattactgtctgtcttataccatggttgtattagtGCCTGTCTTCTACCATGGTTTTATtagtgtctgtcttataccatggttgtattactgtctgtcttataccatggttgtattactgtctgtcttataccatggttgtatcaCTCTCTGTCTTATACCATGTTTGTAttactgtcttataccatggttgtaatACTGTCTGTCTAataccatggttgtattactgtctgttttATACCATGGTtttattactgtctgtcttataccatggtcgtattactgtctgtcttataccatggttgtattactgtctgtcttataccatggttgtattactgtctgtcttataccatggttgtattactttcttataccatggttgtatatTACTGTCTGTCTAATACCATTGTTGTATTAATATAAAATACCATGGTTgcattactgtctgtcttataccatggttgtattactgtctgtctcatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615790 True 664 lncRNA 0.35 2 817232 832842

Neighbor

gene id symbol gene type direction distance location
rnmt rnmt coding upstream 200805 596762 ~ 616427 (+)
seh1l seh1l coding upstream 230073 565124 ~ 587159 (+)
psmg2 psmg2 coding upstream 335075 476232 ~ 482157 (+)
spire1a LOC106589129 coding upstream 467704 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 577664 233676 ~ 240640 (+)
LOC110487806 LOC106570773 coding downstream 103480 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 448091 1280933 ~ 1361298 (+)
LOC110511936 spire1 coding downstream 767508 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 878713 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 1016618 1849460 ~ 1851250 (+)
G2287548 NA non-coding upstream 94540 720705 ~ 722692 (+)
G2287547 NA non-coding upstream 103556 709505 ~ 713676 (+)
G2287545 NA non-coding upstream 109347 706453 ~ 707885 (+)
G2287543 NA non-coding upstream 118730 698236 ~ 698502 (+)
G2287542 NA non-coding upstream 120357 696612 ~ 696875 (+)
G2287845 NA non-coding downstream 138240 971082 ~ 971496 (+)
G2287905 NA non-coding downstream 180233 1013075 ~ 1013400 (+)
G2287930 NA non-coding downstream 209261 1042103 ~ 1042605 (+)
G2287932 NA non-coding downstream 211464 1044306 ~ 1057024 (+)
G2287935 NA non-coding downstream 231249 1064091 ~ 1084625 (+)
G2287470 NA other upstream 329571 486793 ~ 487661 (+)
G2287973 NA other downstream 440532 1273374 ~ 1274170 (+)
triqk triqk other downstream 1376280 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1489032 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1547605 2380447 ~ 2381395 (+)
G2289325 NA other downstream 2227600 3060442 ~ 3060779 (+)

Expression


Co-expression Network