G2287940


Basic Information

Item Value
gene id G2287940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1117001 ~ 1217046 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616212
gcacgccggtccttttgggtgaccaggtgcacaagttccatttgggtgaccaggtgcacgccggcctttgggtgaccaggtgcacgccggcctttgggtgaccaggtgcacatggtccttttgggtgaccaggtgcacgccggcctttgggtgaccaggtgcacgccggcctttgggtgaccaggtgcacacgggtcttttgggtgaccaggtgcacacggtcctttgggtgaccaggtgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616212 True 241 lncRNA 0.63 4 1117001 1217046

Neighbor

gene id symbol gene type direction distance location
LOC110487806 LOC106570773 coding upstream 154885 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 217064 738621 ~ 899937 (+)
rnmt rnmt coding upstream 500574 596762 ~ 616427 (+)
seh1l seh1l coding upstream 529842 565124 ~ 587159 (+)
psmg2 psmg2 coding upstream 634844 476232 ~ 482157 (+)
ncaldb LOC105006551 coding downstream 63887 1280933 ~ 1361298 (+)
LOC110511936 spire1 coding downstream 383304 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 494509 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 632414 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 675544 1892590 ~ 1893952 (+)
G2287937 NA non-coding upstream 19864 1096376 ~ 1097137 (+)
G2287935 NA non-coding upstream 32376 1064091 ~ 1084625 (+)
G2287932 NA non-coding upstream 59977 1044306 ~ 1057024 (+)
G2287930 NA non-coding upstream 74396 1042103 ~ 1042605 (+)
G2287905 NA non-coding upstream 103601 1013075 ~ 1013400 (+)
G2287953 NA non-coding downstream 15807 1232853 ~ 1233308 (+)
G2287954 NA non-coding downstream 16420 1233466 ~ 1234223 (+)
G2287974 NA non-coding downstream 57529 1274575 ~ 1275361 (+)
G2288015 NA non-coding downstream 113225 1330271 ~ 1334705 (+)
G2287981 NA non-coding downstream 146076 1363122 ~ 1369617 (+)
G2287470 NA other upstream 629340 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 876361 233676 ~ 240640 (+)
G2287973 NA other downstream 56328 1273374 ~ 1274170 (+)
triqk triqk other downstream 992076 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1104828 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1163401 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1843396 3060442 ~ 3060779 (+)

Expression


Co-expression Network