G2287973


Basic Information

Item Value
gene id G2287973
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1273374 ~ 1274170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616270
cttatgtcccggtagtggcagtccatttcaaattagtatgacatgtgtcttatctcccggtagtggcagtccatttcaaattagtctgacatgtgTCTTATCTCCCGGTAGTGGCAGTCCATTTCAAATTAGTTTGACATGTGTCTTATCTCCCGGTAGTGGCAGTCCATTTCAAATTAGTTTGACATGTGTCTTATCTCCCGGTCGTGGCGGTCCATTTCAATTGAGTCTGACATGTGTCATATCTCCCGGTCGTGGTAGTCCATTTATAATTAGTCTGACATGtgtcttacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616270 True 511 TUCP 0.40 2 1273374 1274170

Neighbor

gene id symbol gene type direction distance location
LOC110487806 LOC106570773 coding upstream 311258 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 373437 738621 ~ 899937 (+)
rnmt rnmt coding upstream 656947 596762 ~ 616427 (+)
seh1l seh1l coding upstream 686215 565124 ~ 587159 (+)
psmg2 psmg2 coding upstream 791217 476232 ~ 482157 (+)
ncaldb LOC105006551 coding downstream 6763 1280933 ~ 1361298 (+)
LOC110511936 spire1 coding downstream 326180 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 437385 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 575290 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 618420 1892590 ~ 1893952 (+)
G2287954 NA non-coding upstream 39151 1233466 ~ 1234223 (+)
G2287953 NA non-coding upstream 40066 1232853 ~ 1233308 (+)
G2287936 NA non-coding upstream 41396 1086363 ~ 1231978 (+)
G2287942 NA non-coding upstream 51996 1196758 ~ 1221378 (+)
G2287940 NA non-coding upstream 56328 1117001 ~ 1217046 (+)
G2287974 NA non-coding downstream 405 1274575 ~ 1275361 (+)
G2288015 NA non-coding downstream 56101 1330271 ~ 1334705 (+)
G2287981 NA non-coding downstream 88952 1363122 ~ 1369617 (+)
G2288035 NA non-coding downstream 113854 1388024 ~ 1389265 (+)
G2288040 NA non-coding downstream 120366 1394536 ~ 1400935 (+)
G2287470 NA other upstream 785713 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1032734 233676 ~ 240640 (+)
triqk triqk other downstream 934952 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1047704 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1106277 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1786272 3060442 ~ 3060779 (+)
G2290395 NA other downstream 3174719 4448889 ~ 4449571 (+)

Expression


Co-expression Network