G2288035


Basic Information

Item Value
gene id G2288035
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1388024 ~ 1389265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616362
tatatagactggtacccCTCTGTAGAGGTTAAATAGACTGGTATCTCTGTAGAAATTATGTAGACTGGTTCCTCTGTAGAGATTATATAGACTGGTACCTCTCTGTAGAGGTTATATAGACTAGTACCTCTCTGTAGAGTCTATATAGACTGGTAGCTCTGTAGAGGTTATATAGACTGGTACCTCTGTAGAGGTTAAATAGGCTGGTACCTCTGTAGAAATTATATAGACTGGTACTTCTGTAGAGGTTAAATAGACTGGTACCTCTGTAGAGGTTATATAGACTGGTACCTCTGTCGAGGTTATATAGACTCGTACCTCTGTCGAGGTTATATAGACTGGTACCTCTGTAGAGGTTATATAGACTGGTACCTCTGTAGAGGTTAAATAGGCTGGTACCTCTGTAGAAATTATATAGACTGGTACTTCTGTAGAGGTTAAATAGACTGGTACCTCTGTAGAGTTTATATAGACTGTTACCTCTGTCGAGGTTATATAGACTGGTACCTCTGTAGAGGTTATATAGACTGCTACCTCTCTGTAGAGGTTATATAGACTGCTACCTCTCTGTAGAGTCTATATAGACTGGTACCTCTGTAGAGGTTACATAGACTGGTAcctctgtagaggtgatatagaCTGGTACCTCTCTGTAGAGTCTATATAGACTGGTACCTCTCCATAGAGGTTAGATAGACTGGTAcctctgtagaggtgatatagaCTGGTAC
>TU2616363
tatatagactggtacccCTCTGTAGAGGTTAAATAGACTGGTATCTCTGTAGAAATTATGTAGACTGGTTCCTCTGTAGAGATTATATAGACTGGTACCTCTCTGTAGAGGTTATATAGACTAGTACCTCTCTGTAGAGTCTATATAGACTGGTAGCTCTGTAGAGGTTATATAGACTGGTACCTCTGTAGAGGTTAAATAGGCTGGTACCTCTGTAGAAATTATATAGACTGGTACTTCTGTAGAGGTTAAATAGACTGGTACCTCTGTAGAGGTTATATAGACTGGTACCTCTGTCGAGGTTATATAGACTCGTACCTCTGTCGAGGTTATATAGACTGGTACCTCTGTAGAGGTTATATAGACTGGTACCTCTGTAGAGGTTAAATAGGCTGGTACCTCTGTAGAAATTATATAGACTGGTACTTCTGTAGAGGTTAAATAGACTGGTACCTCTGTAGAGATTATGTAGACTGGTTCCTCTGTAGAGATTATATAGACTGGTACCTCTCTGTAGAGG

Function

NR:

description
uncharacterized protein LOC111190814 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616362 False 731 lncRNA 0.40 2 1388024 1388893
TU2616363 True 520 lncRNA 0.40 3 1388024 1389265

Neighbor

gene id symbol gene type direction distance location
ncaldb LOC105006551 coding upstream 26726 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 425908 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 488087 738621 ~ 899937 (+)
rnmt rnmt coding upstream 771597 596762 ~ 616427 (+)
seh1l seh1l coding upstream 800865 565124 ~ 587159 (+)
LOC110511936 spire1 coding downstream 211085 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 322290 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 460195 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 503325 1892590 ~ 1893952 (+)
triqk triqk coding downstream 819754 2209019 ~ 2255119 (+)
G2287981 NA non-coding upstream 18407 1363122 ~ 1369617 (+)
G2288015 NA non-coding upstream 53319 1330271 ~ 1334705 (+)
G2287974 NA non-coding upstream 112663 1274575 ~ 1275361 (+)
G2287954 NA non-coding upstream 153801 1233466 ~ 1234223 (+)
G2287953 NA non-coding upstream 154716 1232853 ~ 1233308 (+)
G2288040 NA non-coding downstream 5271 1394536 ~ 1400935 (+)
G2288041 NA non-coding downstream 5661 1394926 ~ 1404696 (+)
G2288042 NA non-coding downstream 6205 1395470 ~ 1399949 (+)
G2288073 NA non-coding downstream 52656 1441921 ~ 1442688 (+)
G2288090 NA non-coding downstream 82178 1471443 ~ 1471657 (+)
G2287973 NA other upstream 113854 1273374 ~ 1274170 (+)
G2287470 NA other upstream 900363 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1147384 233676 ~ 240640 (+)
G2288669 NA other downstream 932609 2321874 ~ 2324182 (+)
G2288814 NA other downstream 991182 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1671177 3060442 ~ 3060779 (+)
G2290395 NA other downstream 3059624 4448889 ~ 4449571 (+)

Expression


Co-expression Network