G2288042


Basic Information

Item Value
gene id G2288042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1395470 ~ 1399949 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616373
cGTTAGACCATATTAGAAtgttgataagttaaccaaggcatcgttagaccatatcagatcattgataagttaaccaaggcatcgttagaccatatcagTTTGTTGTTtagttaaccaaggcatcgttagaccatatcagattATTAATAAGTTAAAGAAGGCATCGTCAGACCGTATCAGAttgttgataagttaaccaaggcattgTTAGCCCGATAATGTATCCGATCTTtcataagttaaccaaggcaccgttagaccatatcagattgttgataagttaaccaaggcatcgttagaccatatcagatcattgataagCTAACCAAGGCATtgttagaccatatcagatcattgataagttaaccaaggcatcgttagaaCGATAATGTATCAGATCTTTCAAAGTTAACCAAGGCACtgttagaccatatcagattgttgataagttaaccaaggcactgttagaccatatcagattgttgataagttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616373 True 494 lncRNA 0.36 2 1395470 1399949

Neighbor

gene id symbol gene type direction distance location
ncaldb LOC105006551 coding upstream 34172 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 433354 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 495533 738621 ~ 899937 (+)
rnmt rnmt coding upstream 779043 596762 ~ 616427 (+)
seh1l seh1l coding upstream 808311 565124 ~ 587159 (+)
LOC110511936 spire1 coding downstream 200401 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 311606 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 449511 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 492641 1892590 ~ 1893952 (+)
triqk triqk coding downstream 809070 2209019 ~ 2255119 (+)
G2288035 NA non-coding upstream 6205 1388024 ~ 1389265 (+)
G2287981 NA non-coding upstream 25853 1363122 ~ 1369617 (+)
G2288015 NA non-coding upstream 60765 1330271 ~ 1334705 (+)
G2287974 NA non-coding upstream 120109 1274575 ~ 1275361 (+)
G2287954 NA non-coding upstream 161247 1233466 ~ 1234223 (+)
G2288073 NA non-coding downstream 41972 1441921 ~ 1442688 (+)
G2288090 NA non-coding downstream 71494 1471443 ~ 1471657 (+)
G2288159 NA non-coding downstream 72016 1471965 ~ 1472169 (+)
G2288169 NA non-coding downstream 89743 1489692 ~ 1491162 (+)
G2288175 NA non-coding downstream 96158 1496107 ~ 1496390 (+)
G2287973 NA other upstream 121300 1273374 ~ 1274170 (+)
G2287470 NA other upstream 907809 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1154830 233676 ~ 240640 (+)
G2288669 NA other downstream 921925 2321874 ~ 2324182 (+)
G2288814 NA other downstream 980498 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1660493 3060442 ~ 3060779 (+)
G2290395 NA other downstream 3048940 4448889 ~ 4449571 (+)

Expression


Co-expression Network