Gene
RNA
| Item | Value |
|---|---|
| gene id | G2288090 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1471443 ~ 1471657 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2616425 | True | 215 | lncRNA | 0.47 | 1 | 1471443 | 1471657 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ncaldb | LOC105006551 | coding | upstream | 110145 | 1280933 ~ 1361298 (+) |
| LOC110487806 | LOC106570773 | coding | upstream | 509327 | 936322 ~ 962116 (+) |
| rims2b | LOC106570772 | coding | upstream | 571506 | 738621 ~ 899937 (+) |
| rnmt | rnmt | coding | upstream | 855016 | 596762 ~ 616427 (+) |
| seh1l | seh1l | coding | upstream | 884284 | 565124 ~ 587159 (+) |
| LOC110511936 | spire1 | coding | downstream | 128693 | 1600350 ~ 1639573 (+) |
| fam91a1 | LOC106589122 | coding | downstream | 239898 | 1711555 ~ 1825118 (+) |
| lratd2a | LOC106589121 | coding | downstream | 377803 | 1849460 ~ 1851250 (+) |
| LOC118946536 | NA | coding | downstream | 420933 | 1892590 ~ 1893952 (+) |
| triqk | triqk | coding | downstream | 737362 | 2209019 ~ 2255119 (+) |
| G2288073 | NA | non-coding | upstream | 28755 | 1441921 ~ 1442688 (+) |
| G2288041 | NA | non-coding | upstream | 66747 | 1394926 ~ 1404696 (+) |
| G2288040 | NA | non-coding | upstream | 70508 | 1394536 ~ 1400935 (+) |
| G2288042 | NA | non-coding | upstream | 71494 | 1395470 ~ 1399949 (+) |
| G2288035 | NA | non-coding | upstream | 82178 | 1388024 ~ 1389265 (+) |
| G2288159 | NA | non-coding | downstream | 308 | 1471965 ~ 1472169 (+) |
| G2288169 | NA | non-coding | downstream | 18035 | 1489692 ~ 1491162 (+) |
| G2288175 | NA | non-coding | downstream | 24450 | 1496107 ~ 1496390 (+) |
| G2288190 | NA | non-coding | downstream | 36204 | 1507861 ~ 1556943 (+) |
| G2288195 | NA | non-coding | downstream | 47761 | 1519418 ~ 1550796 (+) |
| G2287973 | NA | other | upstream | 197273 | 1273374 ~ 1274170 (+) |
| G2287470 | NA | other | upstream | 983782 | 486793 ~ 487661 (+) |
| rpl30 | LOC106589133 | other | upstream | 1230803 | 233676 ~ 240640 (+) |
| G2288669 | NA | other | downstream | 850217 | 2321874 ~ 2324182 (+) |
| G2288814 | NA | other | downstream | 908790 | 2380447 ~ 2381395 (+) |
| G2289325 | NA | other | downstream | 1588785 | 3060442 ~ 3060779 (+) |
| G2290395 | NA | other | downstream | 2977232 | 4448889 ~ 4449571 (+) |
