G2288175


Basic Information

Item Value
gene id G2288175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1496107 ~ 1496390 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616532
gagacatacactgcctgcattagttaaccttgttggaacttttaaagaaccgtcagacctagagttccgaaactttagaaacctgttctagacctcaggtcgatagtgcgtggtgagttacgtggctctagaaggttctcggaccgagaaacagccttgtacatttgcaatgacttcaattcatttttgcatcacgaaaatgacgacatttagaaatgtcccagagtcacaagactaggtgcattgcgaccgtctcggcccatatagacggaccccaacgtttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616532 True 284 lncRNA 0.45 1 1496107 1496390

Neighbor

gene id symbol gene type direction distance location
ncaldb LOC105006551 coding upstream 134809 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 533991 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 596170 738621 ~ 899937 (+)
rnmt rnmt coding upstream 879680 596762 ~ 616427 (+)
seh1l seh1l coding upstream 908948 565124 ~ 587159 (+)
LOC110511936 spire1 coding downstream 103960 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 215165 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 353070 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 396200 1892590 ~ 1893952 (+)
triqk triqk coding downstream 712629 2209019 ~ 2255119 (+)
G2288169 NA non-coding upstream 4945 1489692 ~ 1491162 (+)
G2288159 NA non-coding upstream 23938 1471965 ~ 1472169 (+)
G2288090 NA non-coding upstream 24450 1471443 ~ 1471657 (+)
G2288073 NA non-coding upstream 53419 1441921 ~ 1442688 (+)
G2288041 NA non-coding upstream 91411 1394926 ~ 1404696 (+)
G2288190 NA non-coding downstream 11471 1507861 ~ 1556943 (+)
G2288195 NA non-coding downstream 23028 1519418 ~ 1550796 (+)
G2288193 NA non-coding downstream 40960 1537350 ~ 1561122 (+)
G2288192 NA non-coding downstream 44433 1540823 ~ 1563864 (+)
G2288201 NA non-coding downstream 50713 1547103 ~ 1548596 (+)
G2287973 NA other upstream 221937 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1008446 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1255467 233676 ~ 240640 (+)
G2288669 NA other downstream 825484 2321874 ~ 2324182 (+)
G2288814 NA other downstream 884057 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1564052 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2952499 4448889 ~ 4449571 (+)

Expression


Co-expression Network