Gene
RNA
| Item | Value |
|---|---|
| gene id | G2288202 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 1556098 ~ 1563194 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2616569 | False | 202 | lncRNA | 0.36 | 2 | 1556098 | 1557162 |
| TU2616570 | True | 311 | lncRNA | 0.37 | 2 | 1556098 | 1563194 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ncaldb | LOC105006551 | coding | upstream | 194800 | 1280933 ~ 1361298 (+) |
| LOC110487806 | LOC106570773 | coding | upstream | 593982 | 936322 ~ 962116 (+) |
| rims2b | LOC106570772 | coding | upstream | 656161 | 738621 ~ 899937 (+) |
| rnmt | rnmt | coding | upstream | 939671 | 596762 ~ 616427 (+) |
| seh1l | seh1l | coding | upstream | 968939 | 565124 ~ 587159 (+) |
| LOC110511936 | spire1 | coding | downstream | 37156 | 1600350 ~ 1639573 (+) |
| fam91a1 | LOC106589122 | coding | downstream | 148361 | 1711555 ~ 1825118 (+) |
| lratd2a | LOC106589121 | coding | downstream | 286266 | 1849460 ~ 1851250 (+) |
| LOC118946536 | NA | coding | downstream | 329396 | 1892590 ~ 1893952 (+) |
| triqk | triqk | coding | downstream | 645825 | 2209019 ~ 2255119 (+) |
| G2288195 | NA | non-coding | upstream | 5302 | 1519418 ~ 1550796 (+) |
| G2288201 | NA | non-coding | upstream | 7502 | 1547103 ~ 1548596 (+) |
| G2288175 | NA | non-coding | upstream | 59708 | 1496107 ~ 1496390 (+) |
| G2288169 | NA | non-coding | upstream | 64936 | 1489692 ~ 1491162 (+) |
| G2288159 | NA | non-coding | upstream | 83929 | 1471965 ~ 1472169 (+) |
| G2288214 | NA | non-coding | downstream | 17759 | 1580953 ~ 1581253 (+) |
| G2288215 | NA | non-coding | downstream | 27142 | 1590336 ~ 1590632 (+) |
| G2288217 | NA | non-coding | downstream | 33481 | 1596675 ~ 1597150 (+) |
| G2288233 | NA | non-coding | downstream | 84436 | 1647630 ~ 1647834 (+) |
| G2288239 | LOC106570780 | non-coding | downstream | 90374 | 1653568 ~ 1659725 (+) |
| G2287973 | NA | other | upstream | 281928 | 1273374 ~ 1274170 (+) |
| G2287470 | NA | other | upstream | 1068437 | 486793 ~ 487661 (+) |
| rpl30 | LOC106589133 | other | upstream | 1315458 | 233676 ~ 240640 (+) |
| G2288669 | NA | other | downstream | 758680 | 2321874 ~ 2324182 (+) |
| G2288814 | NA | other | downstream | 817253 | 2380447 ~ 2381395 (+) |
| G2289325 | NA | other | downstream | 1497248 | 3060442 ~ 3060779 (+) |
| G2290395 | NA | other | downstream | 2885695 | 4448889 ~ 4449571 (+) |
