G2288245


Basic Information

Item Value
gene id G2288245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1674828 ~ 1675367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616667
ACATATAACTCTGTCTGGTTTCTACATATAACTCTGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGCTTTCTACATATAACTCAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACA
>TU2616668
ACATATAACTCTGTCTGGTTTCTACATATAACTCTGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGCTTTCTACATATAACTCAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACACATAACTCAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACA
>TU2616670
ACATATAACTCTGTCTGGTTTCTACATATAACTCTGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACTCAGTCTGCTTTCTACATATAACTCAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACTCAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACATATAACCACAGTCTGGTTTCTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616667 False 494 lncRNA 0.36 2 1674828 1675367
TU2616668 False 471 lncRNA 0.36 2 1674828 1675367
TU2616670 True 425 lncRNA 0.36 3 1674828 1675367

Neighbor

gene id symbol gene type direction distance location
LOC110511936 spire1 coding upstream 35255 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 313530 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 712712 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 774891 738621 ~ 899937 (+)
rnmt rnmt coding upstream 1058401 596762 ~ 616427 (+)
fam91a1 LOC106589122 coding downstream 36188 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 174093 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 217223 1892590 ~ 1893952 (+)
triqk triqk coding downstream 533652 2209019 ~ 2255119 (+)
cbfa2t2 runx1t1 coding downstream 849692 2525059 ~ 2686032 (+)
G2288239 LOC106570780 non-coding upstream 15103 1653568 ~ 1659725 (+)
G2288233 NA non-coding upstream 26994 1647630 ~ 1647834 (+)
G2288217 NA non-coding upstream 77678 1596675 ~ 1597150 (+)
G2288215 NA non-coding upstream 84196 1590336 ~ 1590632 (+)
G2288214 NA non-coding upstream 93575 1580953 ~ 1581253 (+)
G2288246 NA non-coding downstream 1546 1676913 ~ 1677148 (+)
G2288249 NA non-coding downstream 13895 1689262 ~ 1689564 (+)
G2288250 NA non-coding downstream 17023 1692390 ~ 1692639 (+)
G2288268 NA non-coding downstream 23028 1698395 ~ 1698604 (+)
G2288305 NA non-coding downstream 56005 1731372 ~ 1732667 (+)
G2287973 NA other upstream 400658 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1187167 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1434188 233676 ~ 240640 (+)
G2288669 NA other downstream 646507 2321874 ~ 2324182 (+)
G2288814 NA other downstream 705080 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1385075 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2773522 4448889 ~ 4449571 (+)

Expression


Co-expression Network