G2288249


Basic Information

Item Value
gene id G2288249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1689262 ~ 1689564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616674
ATACCCTATAGATCTATAGATGAACGATAGGAGAATCAACAGAAATACCCTATAGATCTATAGATGAACGATAGGAGAATCAACAGAAATACCCTATAGATCTATAGATGAACGATAGGAGAATCAACAGAAATACCCTATAGATCTATAGATGAACGATAGGAGAATCAACAGAAATACCCTATAGATCTATAGATGAACGATAGGAGAAACAACAGAAATACCCTATAGATCTAAATTAGACACAGGGTTGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616674 True 257 lncRNA 0.35 2 1689262 1689564

Neighbor

gene id symbol gene type direction distance location
LOC110511936 spire1 coding upstream 49689 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 327964 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 727146 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 789325 738621 ~ 899937 (+)
rnmt rnmt coding upstream 1072835 596762 ~ 616427 (+)
fam91a1 LOC106589122 coding downstream 21991 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 159896 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 203026 1892590 ~ 1893952 (+)
triqk triqk coding downstream 519455 2209019 ~ 2255119 (+)
cbfa2t2 runx1t1 coding downstream 835495 2525059 ~ 2686032 (+)
G2288246 NA non-coding upstream 12114 1676913 ~ 1677148 (+)
G2288245 NA non-coding upstream 13895 1674828 ~ 1675367 (+)
G2288239 LOC106570780 non-coding upstream 29537 1653568 ~ 1659725 (+)
G2288233 NA non-coding upstream 41428 1647630 ~ 1647834 (+)
G2288217 NA non-coding upstream 92112 1596675 ~ 1597150 (+)
G2288250 NA non-coding downstream 2826 1692390 ~ 1692639 (+)
G2288268 NA non-coding downstream 8831 1698395 ~ 1698604 (+)
G2288305 NA non-coding downstream 41808 1731372 ~ 1732667 (+)
G2288311 NA non-coding downstream 55739 1745303 ~ 1745659 (+)
G2288293 NA non-coding downstream 93179 1782743 ~ 1783505 (+)
G2287973 NA other upstream 415092 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1201601 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1448622 233676 ~ 240640 (+)
G2288669 NA other downstream 632310 2321874 ~ 2324182 (+)
G2288814 NA other downstream 690883 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1370878 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2759325 4448889 ~ 4449571 (+)

Expression


Co-expression Network