G2288293


Basic Information

Item Value
gene id G2288293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1782743 ~ 1783505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616736
tactatattactatactactatatcactatactactatatcactataatactatatcactacactactatatcactacactactatatcactgtaacactatactactatatcaccacactactatatcaccacactactatatcaccacactactatatcactgcactactatatcactatactactatatcaccacactactatatcactatactactatatcactatactactatatcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616736 True 243 lncRNA 0.30 2 1782743 1783505

Neighbor

gene id symbol gene type direction distance location
LOC110511936 spire1 coding upstream 143170 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 421445 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 820627 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 882806 738621 ~ 899937 (+)
rnmt rnmt coding upstream 1166316 596762 ~ 616427 (+)
lratd2a LOC106589121 coding downstream 65955 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 109085 1892590 ~ 1893952 (+)
triqk triqk coding downstream 425514 2209019 ~ 2255119 (+)
cbfa2t2 runx1t1 coding downstream 741554 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 983180 2766685 ~ 2800192 (+)
G2288311 NA non-coding upstream 37084 1745303 ~ 1745659 (+)
G2288305 NA non-coding upstream 50076 1731372 ~ 1732667 (+)
G2288268 NA non-coding upstream 84139 1698395 ~ 1698604 (+)
G2288250 NA non-coding upstream 90104 1692390 ~ 1692639 (+)
G2288249 NA non-coding upstream 93179 1689262 ~ 1689564 (+)
G2288283 NA non-coding downstream 4762 1788267 ~ 1829444 (+)
G2288334 NA non-coding downstream 59837 1843342 ~ 1848514 (+)
G2288335 NA non-coding downstream 60214 1843719 ~ 1845066 (+)
G2288336 NA non-coding downstream 63307 1846812 ~ 1848257 (+)
G2288340 NA non-coding downstream 73823 1857328 ~ 1878374 (+)
G2287973 NA other upstream 508573 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1295082 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1542103 233676 ~ 240640 (+)
G2288669 NA other downstream 538369 2321874 ~ 2324182 (+)
G2288814 NA other downstream 596942 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1276937 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2665384 4448889 ~ 4449571 (+)

Expression


Co-expression Network