G2288335


Basic Information

Item Value
gene id G2288335
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1843719 ~ 1845066 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616789
GTTTAGTAGACTAGAAGGTGTGAGATACTAAGGAACATGTTAGTAGACTAGATGACGTGAGACACTGaggaacagtttagtagactagAAGGTGTGAGCTTCTAACAGTTTAGTAGACTAGAAGGTGTGAGCTTCTAACAGTTTAGTAGACTAGAAGGTGTGAGATTCTAACAGTTTAGTAGACTAGAAGGTGTGAGATTCTAACAGTTTAGTATAGAAGGTGTGAGACactaaggaacagtttagtaggCTAGACGATGTGAGACactaaggaacagtttagtagactagaaggtgtgagacaccaaggaacagtttagtagactagACGATGTGAGATACTAAGGAACATTTCAGTAGACTAGAAGGTGTGAGACactaaggaacagtttagtagactagACGATGTGAGATACTAAGGAACATGTTAGTAGACTAGATGATGTGAGACactaaggaacagtttagtagactagAAGGTGTGAGATTCTAACAGTTTAGTAGACTAGAAGGTGTGAGATactaaggaacagtttagtagactagAAGGTGTGAGATACTAAGGAACATTTTAGTAGACTAGAAGGTGTGAGACactaaggaacagtttagtagatTAGAAGGTGTGAGACactaaggaacagtttagtagatTAGAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616789 True 661 lncRNA 0.39 2 1843719 1845066

Neighbor

gene id symbol gene type direction distance location
fam91a1 LOC106589122 coding upstream 18601 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 204146 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 482421 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 881603 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 943782 738621 ~ 899937 (+)
lratd2a LOC106589121 coding downstream 4394 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 47524 1892590 ~ 1893952 (+)
triqk triqk coding downstream 363953 2209019 ~ 2255119 (+)
cbfa2t2 runx1t1 coding downstream 679993 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 921619 2766685 ~ 2800192 (+)
G2288283 NA non-coding upstream 14275 1788267 ~ 1829444 (+)
G2288293 NA non-coding upstream 60214 1782743 ~ 1783505 (+)
G2288311 NA non-coding upstream 98060 1745303 ~ 1745659 (+)
G2288305 NA non-coding upstream 111052 1731372 ~ 1732667 (+)
G2288268 NA non-coding upstream 145115 1698395 ~ 1698604 (+)
G2288336 NA non-coding downstream 1746 1846812 ~ 1848257 (+)
G2288340 NA non-coding downstream 12262 1857328 ~ 1878374 (+)
G2288344 NA non-coding downstream 18226 1863292 ~ 1867092 (+)
G2288446 NA non-coding downstream 53014 1898080 ~ 1898672 (+)
G2288452 NA non-coding downstream 60705 1905771 ~ 1906229 (+)
G2287973 NA other upstream 569549 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1356058 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1603079 233676 ~ 240640 (+)
G2288669 NA other downstream 476808 2321874 ~ 2324182 (+)
G2288814 NA other downstream 535381 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1215376 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2603823 4448889 ~ 4449571 (+)

Expression


Co-expression Network