G2288336


Basic Information

Item Value
gene id G2288336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1846812 ~ 1848257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616790
AACATGTTAGTAGACTAGATGATGTGAGACactaaggaacagtttagtagactagAAGGTGTGAGATTCTAACAGTTTAGTAGACTAGAAGGTGTGAGATactaaggaacagtttagtagactagAAGGTGTGAGATACTAAGGAACATTTTAGTAGACTAGAAGgtgtgagacactaaggaacagtttagtagactagaaggtgtgagacaaaaaggaacagtttagtagactagacgatgtgagacactaaggaacagtttagtagactagaaggtgtgagacactaaggaacagtttagtagactagAAGGTGTGAGACCAAGGAACCGTTTATTAGACTAGGTGATGTGAGACACcaaggaacagtttagtagactagAAGGCGTGAGACACTAAGGGACAGTTTAGTAGACTAGAAGGTGTGAG
>TU2616791
ATactaaggaacagtttagtagactagaaggtgtgagatactaaggaacagtttagtagactagaaggtgtgagacactaaggaacagtttagtagactagaaggtgtgagacaaaaaggaacagtttagtagactagacgatgtgagacactaaggaacagtttagtagactagaaggtgtgagacactaaggaacagtttagtagactagAAGGTGTGAGACCAAGGAACCGTTTATTAGACTAGGTGATGTGAGACACcaaggaacagtttagtagactagAAGGCGTGAGACACTAAGGGACAGTTTAGTAGACTAGAAGGTGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616790 False 429 lncRNA 0.40 3 1846812 1848257
TU2616791 True 331 lncRNA 0.41 2 1847635 1848257

Neighbor

gene id symbol gene type direction distance location
fam91a1 LOC106589122 coding upstream 21694 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 207239 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 485514 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 884696 936322 ~ 962116 (+)
rims2b LOC106570772 coding upstream 946875 738621 ~ 899937 (+)
lratd2a LOC106589121 coding downstream 1203 1849460 ~ 1851250 (+)
LOC118946536 NA coding downstream 44333 1892590 ~ 1893952 (+)
triqk triqk coding downstream 360762 2209019 ~ 2255119 (+)
cbfa2t2 runx1t1 coding downstream 676802 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 918428 2766685 ~ 2800192 (+)
G2288335 NA non-coding upstream 1746 1843719 ~ 1845066 (+)
G2288283 NA non-coding upstream 17368 1788267 ~ 1829444 (+)
G2288293 NA non-coding upstream 63307 1782743 ~ 1783505 (+)
G2288311 NA non-coding upstream 101153 1745303 ~ 1745659 (+)
G2288305 NA non-coding upstream 114145 1731372 ~ 1732667 (+)
G2288340 NA non-coding downstream 9071 1857328 ~ 1878374 (+)
G2288344 NA non-coding downstream 15035 1863292 ~ 1867092 (+)
G2288446 NA non-coding downstream 49823 1898080 ~ 1898672 (+)
G2288452 NA non-coding downstream 57514 1905771 ~ 1906229 (+)
G2288489 NA non-coding downstream 97094 1945351 ~ 1954328 (+)
G2287973 NA other upstream 572642 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1359151 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1606172 233676 ~ 240640 (+)
G2288669 NA other downstream 473617 2321874 ~ 2324182 (+)
G2288814 NA other downstream 532190 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1212185 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2600632 4448889 ~ 4449571 (+)

Expression


Co-expression Network