G2288452


Basic Information

Item Value
gene id G2288452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1905771 ~ 1906229 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2616972
acatgtattgatcacatctttactaatactGCAGAAATATgattgaaagcagtatccagatccatcagaagtagtgatcacaatatagtataGCAATATCTatgaaaaccaaagttccaaaggctgggcctaatatagtgtataagaggtcaggctgggcctaatatagtgtataagaggacaggctgggcctaatatagtgtataagaggacaggctgggcctaatatagtgtataagaggacaggctgggcctaatatagtgtataagtggtcaggctgggcctaatatagtgtataagaggtcaggctgggcctaatatagtgtataagaggacaggctgggcctaatatagtgtataagaggtcaggctgggcctaatatagtggaTAAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2616972 True 397 lncRNA 0.41 2 1905771 1906229

Neighbor

gene id symbol gene type direction distance location
LOC118946536 NA coding upstream 11819 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 54521 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 80653 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 266198 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 544473 1280933 ~ 1361298 (+)
triqk triqk coding downstream 302790 2209019 ~ 2255119 (+)
cbfa2t2 runx1t1 coding downstream 618830 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 860456 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 910247 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 977699 2883928 ~ 2886784 (+)
G2288446 NA non-coding upstream 7099 1898080 ~ 1898672 (+)
G2288340 NA non-coding upstream 27397 1857328 ~ 1878374 (+)
G2288344 NA non-coding upstream 38679 1863292 ~ 1867092 (+)
G2288334 NA non-coding upstream 57257 1843342 ~ 1848514 (+)
G2288336 NA non-coding upstream 57514 1846812 ~ 1848257 (+)
G2288489 NA non-coding downstream 39122 1945351 ~ 1954328 (+)
G2288551 NA non-coding downstream 184283 2090512 ~ 2090874 (+)
G2288558 NA non-coding downstream 192581 2098810 ~ 2099142 (+)
G2288564 NA non-coding downstream 198539 2104768 ~ 2105113 (+)
G2288586 NA non-coding downstream 214318 2120547 ~ 2120751 (+)
G2287973 NA other upstream 631601 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1418110 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1665131 233676 ~ 240640 (+)
G2288669 NA other downstream 415645 2321874 ~ 2324182 (+)
G2288814 NA other downstream 474218 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1154213 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2542660 4448889 ~ 4449571 (+)

Expression


Co-expression Network