G2288558


Basic Information

Item Value
gene id G2288558
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2098810 ~ 2099142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617113
GTCTCtccttattattggtgtcctttagtagtggtttctttgcagcaattcgacaatgaaggcctgattcacgcagtctcctcagaacagtcgatggtgagatgtgtctgttacttgaactctgtgaagcatttatttgggctgcaatttctgagactggtaactctaatgaacttatcctctgcagcagaagtaactctgggtcttcctttctgtggcggttcctcatgagagccagtttcatcaaggtgcttgatggtttttcctcagttgaaaaaaaacatttaaagttattgacattttccacattcaatgaccttcatgtcttaaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617113 True 333 lncRNA 0.41 1 2098810 2099142

Neighbor

gene id symbol gene type direction distance location
LOC118946536 NA coding upstream 204858 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 247560 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 273692 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 459237 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 737512 1280933 ~ 1361298 (+)
triqk triqk coding downstream 109877 2209019 ~ 2255119 (+)
cbfa2t2 runx1t1 coding downstream 425917 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 667543 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 717334 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 784786 2883928 ~ 2886784 (+)
G2288551 NA non-coding upstream 7936 2090512 ~ 2090874 (+)
G2288489 NA non-coding upstream 144482 1945351 ~ 1954328 (+)
G2288452 NA non-coding upstream 192581 1905771 ~ 1906229 (+)
G2288446 NA non-coding upstream 200138 1898080 ~ 1898672 (+)
G2288340 NA non-coding upstream 220436 1857328 ~ 1878374 (+)
G2288564 NA non-coding downstream 5626 2104768 ~ 2105113 (+)
G2288586 NA non-coding downstream 21405 2120547 ~ 2120751 (+)
G2288590 NA non-coding downstream 25310 2124452 ~ 2124656 (+)
G2288601 NA non-coding downstream 42018 2141160 ~ 2141371 (+)
G2288615 NA non-coding downstream 66827 2165969 ~ 2166177 (+)
G2287973 NA other upstream 824640 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1611149 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1858170 233676 ~ 240640 (+)
G2288669 NA other downstream 222732 2321874 ~ 2324182 (+)
G2288814 NA other downstream 281305 2380447 ~ 2381395 (+)
G2289325 NA other downstream 961300 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2349747 4448889 ~ 4449571 (+)

Expression


Co-expression Network