Gene
RNA
| Item | Value |
|---|---|
| gene id | G2288586 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 2120547 ~ 2120751 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2617143 | True | 205 | lncRNA | 0.53 | 1 | 2120547 | 2120751 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946536 | NA | coding | upstream | 226595 | 1892590 ~ 1893952 (+) |
| lratd2a | LOC106589121 | coding | upstream | 269297 | 1849460 ~ 1851250 (+) |
| fam91a1 | LOC106589122 | coding | upstream | 295429 | 1711555 ~ 1825118 (+) |
| LOC110511936 | spire1 | coding | upstream | 480974 | 1600350 ~ 1639573 (+) |
| ncaldb | LOC105006551 | coding | upstream | 759249 | 1280933 ~ 1361298 (+) |
| triqk | triqk | coding | downstream | 88268 | 2209019 ~ 2255119 (+) |
| cbfa2t2 | runx1t1 | coding | downstream | 404308 | 2525059 ~ 2686032 (+) |
| pip4p2 | LOC106570754 | coding | downstream | 645934 | 2766685 ~ 2800192 (+) |
| LOC110487823 | LOC106570755 | coding | downstream | 695725 | 2816476 ~ 2845566 (+) |
| LOC110487826 | znf519 | coding | downstream | 763177 | 2883928 ~ 2886784 (+) |
| G2288564 | NA | non-coding | upstream | 15434 | 2104768 ~ 2105113 (+) |
| G2288558 | NA | non-coding | upstream | 21405 | 2098810 ~ 2099142 (+) |
| G2288551 | NA | non-coding | upstream | 29673 | 2090512 ~ 2090874 (+) |
| G2288489 | NA | non-coding | upstream | 166219 | 1945351 ~ 1954328 (+) |
| G2288452 | NA | non-coding | upstream | 214318 | 1905771 ~ 1906229 (+) |
| G2288590 | NA | non-coding | downstream | 3701 | 2124452 ~ 2124656 (+) |
| G2288601 | NA | non-coding | downstream | 20409 | 2141160 ~ 2141371 (+) |
| G2288615 | NA | non-coding | downstream | 45218 | 2165969 ~ 2166177 (+) |
| G2288617 | NA | non-coding | downstream | 46389 | 2167140 ~ 2167407 (+) |
| G2288629 | NA | non-coding | downstream | 65344 | 2186095 ~ 2186310 (+) |
| G2287973 | NA | other | upstream | 846377 | 1273374 ~ 1274170 (+) |
| G2287470 | NA | other | upstream | 1632886 | 486793 ~ 487661 (+) |
| rpl30 | LOC106589133 | other | upstream | 1879907 | 233676 ~ 240640 (+) |
| G2288669 | NA | other | downstream | 201123 | 2321874 ~ 2324182 (+) |
| G2288814 | NA | other | downstream | 259696 | 2380447 ~ 2381395 (+) |
| G2289325 | NA | other | downstream | 939691 | 3060442 ~ 3060779 (+) |
| G2290395 | NA | other | downstream | 2328138 | 4448889 ~ 4449571 (+) |
