Gene
RNA
| Item | Value |
|---|---|
| gene id | G2288590 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 2124452 ~ 2124656 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2617147 | True | 205 | lncRNA | 0.53 | 1 | 2124452 | 2124656 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946536 | NA | coding | upstream | 230500 | 1892590 ~ 1893952 (+) |
| lratd2a | LOC106589121 | coding | upstream | 273202 | 1849460 ~ 1851250 (+) |
| fam91a1 | LOC106589122 | coding | upstream | 299334 | 1711555 ~ 1825118 (+) |
| LOC110511936 | spire1 | coding | upstream | 484879 | 1600350 ~ 1639573 (+) |
| ncaldb | LOC105006551 | coding | upstream | 763154 | 1280933 ~ 1361298 (+) |
| triqk | triqk | coding | downstream | 84363 | 2209019 ~ 2255119 (+) |
| cbfa2t2 | runx1t1 | coding | downstream | 400403 | 2525059 ~ 2686032 (+) |
| pip4p2 | LOC106570754 | coding | downstream | 642029 | 2766685 ~ 2800192 (+) |
| LOC110487823 | LOC106570755 | coding | downstream | 691820 | 2816476 ~ 2845566 (+) |
| LOC110487826 | znf519 | coding | downstream | 759272 | 2883928 ~ 2886784 (+) |
| G2288586 | NA | non-coding | upstream | 3701 | 2120547 ~ 2120751 (+) |
| G2288564 | NA | non-coding | upstream | 19339 | 2104768 ~ 2105113 (+) |
| G2288558 | NA | non-coding | upstream | 25310 | 2098810 ~ 2099142 (+) |
| G2288551 | NA | non-coding | upstream | 33578 | 2090512 ~ 2090874 (+) |
| G2288489 | NA | non-coding | upstream | 170124 | 1945351 ~ 1954328 (+) |
| G2288601 | NA | non-coding | downstream | 16504 | 2141160 ~ 2141371 (+) |
| G2288615 | NA | non-coding | downstream | 41313 | 2165969 ~ 2166177 (+) |
| G2288617 | NA | non-coding | downstream | 42484 | 2167140 ~ 2167407 (+) |
| G2288629 | NA | non-coding | downstream | 61439 | 2186095 ~ 2186310 (+) |
| G2288632 | NA | non-coding | downstream | 64254 | 2188910 ~ 2189132 (+) |
| G2287973 | NA | other | upstream | 850282 | 1273374 ~ 1274170 (+) |
| G2287470 | NA | other | upstream | 1636791 | 486793 ~ 487661 (+) |
| rpl30 | LOC106589133 | other | upstream | 1883812 | 233676 ~ 240640 (+) |
| G2288669 | NA | other | downstream | 197218 | 2321874 ~ 2324182 (+) |
| G2288814 | NA | other | downstream | 255791 | 2380447 ~ 2381395 (+) |
| G2289325 | NA | other | downstream | 935786 | 3060442 ~ 3060779 (+) |
| G2290395 | NA | other | downstream | 2324233 | 4448889 ~ 4449571 (+) |
