G2288613


Basic Information

Item Value
gene id G2288613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2210076 ~ 2256030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617173
cctttatttaaccaggtaggccagtcgagaacaagttctcatttgcaactgcgacctggccaagataaagcaaagcaattcgacacaaacaacaacacagagttacacatggagtaaacaaaacatacagtcaataatacagtagaacaaaagaaaacaaaaagtatatatacagtgagtgcaaatgaggtaagttaaggaaatgaATAGGCcacggtggcgaagtaattacaatatagcaattaaacactggaatggtagatcggcagaagatgaatgtgcaggtagagatactggggtgcaaaggagctaaataaataaataaatacagtatggggatgaggtaggtagatgggctgtttacagatgggctacgtaCAGGTGCAGTTTCATTGCCCCCTTTTGTTTGACTGTAATACCATCTGAAAAGTAACGTTGTCCAGTTGCCTTCATAAACTATtaacacctcttgacttttcctgcattttgttgtgttacaaagtgtccttaagagtctattgacgcaCCCGTGTGCATCAATCGAAATAACATaacaaaatccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617173 True 563 lncRNA 0.39 2 2210076 2256030

Neighbor

gene id symbol gene type direction distance location
LOC118946536 NA coding upstream 316124 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 358826 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 384958 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 570503 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 848778 1280933 ~ 1361298 (+)
cbfa2t2 runx1t1 coding downstream 269029 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 510655 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 560446 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 627898 2883928 ~ 2886784 (+)
angpt2b LOC106570762 coding downstream 674114 2930144 ~ 2992088 (+)
G2288632 NA non-coding upstream 20944 2188910 ~ 2189132 (+)
G2288629 NA non-coding upstream 23766 2186095 ~ 2186310 (+)
G2288617 NA non-coding upstream 42669 2167140 ~ 2167407 (+)
G2288615 NA non-coding upstream 43899 2165969 ~ 2166177 (+)
G2288601 NA non-coding upstream 68705 2141160 ~ 2141371 (+)
G2288660 NA non-coding downstream 7079 2263109 ~ 2268821 (+)
G2288671 NA non-coding downstream 29764 2285794 ~ 2286419 (+)
G2288677 NA non-coding downstream 39154 2295184 ~ 2297611 (+)
G2288688 NA non-coding downstream 64128 2320158 ~ 2321176 (+)
G2288773 NA non-coding downstream 70545 2326575 ~ 2327102 (+)
G2287973 NA other upstream 935906 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1722415 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1969436 233676 ~ 240640 (+)
G2288669 NA other downstream 65844 2321874 ~ 2324182 (+)
G2288814 NA other downstream 124417 2380447 ~ 2381395 (+)
G2289325 NA other downstream 804412 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2192859 4448889 ~ 4449571 (+)
G2290455 NA other downstream 2290874 4546904 ~ 4548844 (+)

Expression


Co-expression Network