G2288660


Basic Information

Item Value
gene id G2288660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2263109 ~ 2268821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617228
cacacacacactactgtaacCCATTAAGGCAGTTTCTAAAATCTAGATGATATAGAATAAATGTCTGGAACATGACTACAATGGATGGTGGTGGGGAGTCTTTCATTTCCAGCTAACACATCCTGTATAACACACCAGTCACTTCCTGTCTCTAGTGCTTCCTAAGTTCCAGGTAACAGCTGGGAGGTGTTCACACATCACCTCCCTCATCATCAGCCACAGCTGGCCAATACGCAGTTAACAGTAGGAGGCGACTAATAACCTTCCTAGTTGCACTGTCCCCTGTACATTTATGAAAGCTCAATGGTCTTTTTTCTAagggtgagtcccaaatggcaccctattccctacatagtgcacacaTTTTTGGTCAGAGCCCCATGGACCCCGGTTAATTGTAGTGCACTAAAAAGGGAAAATGGTTCCGTTTGGGAGACAGACTAAATGTATTGTATTAAGAGTGCCCGTCCCACGCGAGGCACTAAGGTTCCCACCTTATATATTATCCCCGTGGAGTTCTGCAGGTTAACAATGAAGCCTGTATTTTAACAAAATACAGGAGAGCAACTTTACGGGTATTACAAATGACTCACATTTACTGAATGATGAAGGTAAACGGCTTATGTTCCTACAGCTAGTTAGGATTAGTCAGGATGGTGGACACTTTTATGATCGTGAATCTTGAGGACTGCAGATACTGTGGGGACATACTTGAAAATATTAGGACAAGTTCCATGGTTAAGTTTTAAGCATCGGGCAAATTAAAATCGTTGACTGTGTGTCACGAGACACGTGAACGCTACGTTGTAGCTGGTCCCATCAGATAACATGGCACACGTTAGCCCGATGCTAGCCTCAACAGCTGGCAGGGATTCTTCACTGAAGTAACTTCCTCATCCAAATGTGTCTGTGTGCTAGTATGTCCCCTGACTCTAACCCCTGTGTGTCTAAGACTACAGTACCTTCTCCTGGGGCATTACAGCTAATCTGAACCTATATTATAACAAGAATCTGACGACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617228 True 1022 lncRNA 0.44 2 2263109 2268821

Neighbor

gene id symbol gene type direction distance location
triqk triqk coding upstream 7990 2209019 ~ 2255119 (+)
LOC118946536 NA coding upstream 369157 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 411859 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 437991 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 623536 1600350 ~ 1639573 (+)
cbfa2t2 runx1t1 coding downstream 256238 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 497864 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 547655 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 615107 2883928 ~ 2886784 (+)
angpt2b LOC106570762 coding downstream 661323 2930144 ~ 2992088 (+)
G2288613 NA non-coding upstream 7079 2210076 ~ 2256030 (+)
G2288655 NA non-coding upstream 9704 2252942 ~ 2253405 (+)
G2288632 NA non-coding upstream 73977 2188910 ~ 2189132 (+)
G2288629 NA non-coding upstream 76799 2186095 ~ 2186310 (+)
G2288617 NA non-coding upstream 95702 2167140 ~ 2167407 (+)
G2288671 NA non-coding downstream 16973 2285794 ~ 2286419 (+)
G2288677 NA non-coding downstream 26363 2295184 ~ 2297611 (+)
G2288688 NA non-coding downstream 51337 2320158 ~ 2321176 (+)
G2288773 NA non-coding downstream 57754 2326575 ~ 2327102 (+)
G2288777 NA non-coding downstream 61163 2329984 ~ 2330629 (+)
G2287973 NA other upstream 988939 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1775448 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 2022469 233676 ~ 240640 (+)
G2288669 NA other downstream 53053 2321874 ~ 2324182 (+)
G2288814 NA other downstream 111626 2380447 ~ 2381395 (+)
G2289325 NA other downstream 791621 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2180068 4448889 ~ 4449571 (+)
G2290455 NA other downstream 2278083 4546904 ~ 4548844 (+)

Expression


Co-expression Network