G2288792


Basic Information

Item Value
gene id G2288792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2353784 ~ 2354036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617388
TGTTGATTTCCCAGCATGTTGTTCTCCCAGCATGTTGATCTCTCAGCATGTTGATTTCCCAGCATGTTGTTCTCTCAGCATGTTGATTTCCCAGCATGTTGTTCTCCCAGCATGTTGATCTCCCAGTATGTTGTTCTCCCAGCATGTTGTTCTCCCAGCATGTTGTTCTCCCAGCATGTTATTCTCCCAGCATGTTGTTCTCCCAGCATGTTGTTCTCCCAGCATGTTGTTCTCTCAGCATGTTGATTTCCCA

Function

NR:

description
PDZ domain-containing protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617388 True 253 lncRNA 0.46 1 2353784 2354036

Neighbor

gene id symbol gene type direction distance location
triqk triqk coding upstream 98665 2209019 ~ 2255119 (+)
LOC118946536 NA coding upstream 459832 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 502534 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 528666 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 714211 1600350 ~ 1639573 (+)
cbfa2t2 runx1t1 coding downstream 171023 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 412649 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 462440 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 529892 2883928 ~ 2886784 (+)
angpt2b LOC106570762 coding downstream 576108 2930144 ~ 2992088 (+)
G2288787 NA non-coding upstream 8760 2344795 ~ 2345024 (+)
G2288780 NA non-coding upstream 21488 2331992 ~ 2332296 (+)
G2288777 NA non-coding upstream 23155 2329984 ~ 2330629 (+)
G2288773 NA non-coding upstream 26682 2326575 ~ 2327102 (+)
G2288688 NA non-coding upstream 32608 2320158 ~ 2321176 (+)
G2288826 NA non-coding downstream 88070 2442106 ~ 2442470 (+)
G2288827 NA non-coding downstream 88870 2442906 ~ 2443352 (+)
G2288834 NA non-coding downstream 96998 2451034 ~ 2451766 (+)
G2288839 NA non-coding downstream 100903 2454939 ~ 2455158 (+)
G2288898 NA non-coding downstream 159467 2513503 ~ 2513739 (+)
G2288669 NA other upstream 29602 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1079614 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1866123 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 2113144 233676 ~ 240640 (+)
G2288814 NA other downstream 26411 2380447 ~ 2381395 (+)
G2289325 NA other downstream 706406 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2094853 4448889 ~ 4449571 (+)
G2290455 NA other downstream 2192868 4546904 ~ 4548844 (+)
smim12 smim12 other downstream 2660620 5014549 ~ 5018314 (+)

Expression


Co-expression Network