G2288827


Basic Information

Item Value
gene id G2288827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2442906 ~ 2443352 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617436
tttagctgcctcatcagattgtcagtattttggctgcctcatcagatggtcagtattttggctgcctcatcagatggtcagtattttagctgcctcatcagatggtcagtattttggctgcctcatcagatagtattttggttgcctcatcagatggtcagtattttggctgcctcatcagataggattttggttgcctcatcagatggtaaatattttggctgcctcatcagatagtaggttggttgcctcatcggatggtcagtattttggctgcctcatcagatggttagtattttggctgcctcatcagatggtattttggttgcctcatcagatggtcagtattttggctgcctcatcagatggtcattattttggctgcctcatcagatggtcagtattttagctgcctcatcagattgtcagtattttggctgcctcatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617436 True 447 lncRNA 0.44 1 2442906 2443352

Neighbor

gene id symbol gene type direction distance location
triqk triqk coding upstream 187787 2209019 ~ 2255119 (+)
LOC118946536 NA coding upstream 548954 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 591656 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 617788 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 803333 1600350 ~ 1639573 (+)
cbfa2t2 runx1t1 coding downstream 81707 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 323333 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 373124 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 440576 2883928 ~ 2886784 (+)
angpt2b LOC106570762 coding downstream 486792 2930144 ~ 2992088 (+)
G2288826 NA non-coding upstream 436 2442106 ~ 2442470 (+)
G2288792 NA non-coding upstream 88870 2353784 ~ 2354036 (+)
G2288787 NA non-coding upstream 97882 2344795 ~ 2345024 (+)
G2288780 NA non-coding upstream 110610 2331992 ~ 2332296 (+)
G2288777 NA non-coding upstream 112277 2329984 ~ 2330629 (+)
G2288834 NA non-coding downstream 7682 2451034 ~ 2451766 (+)
G2288839 NA non-coding downstream 11587 2454939 ~ 2455158 (+)
G2288898 NA non-coding downstream 70151 2513503 ~ 2513739 (+)
G2288912 NA non-coding downstream 98174 2541526 ~ 2541915 (+)
G2288915 NA non-coding downstream 100849 2544201 ~ 2544731 (+)
G2288814 NA other upstream 61511 2380447 ~ 2381395 (+)
G2288669 NA other upstream 118724 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1168736 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1955245 486793 ~ 487661 (+)
G2289325 NA other downstream 617090 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2005537 4448889 ~ 4449571 (+)
G2290455 NA other downstream 2103552 4546904 ~ 4548844 (+)
smim12 smim12 other downstream 2571304 5014549 ~ 5018314 (+)
dlgap3 dlgap3 other downstream 2941299 5113201 ~ 5412625 (+)

Expression


Co-expression Network