G2288915


Basic Information

Item Value
gene id G2288915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2544201 ~ 2544731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617551
gctctggtctaaagtagtgcactatatagggaatagggtgccatagggctctggtctaaagtagtgcactatatagggaatagagttccatagggctctggtcaaagtagtgtgacatagggctctagtctaaagtagtgcactatatagggaattgggtgccatttgggacatacatAGACTCACTAGGCTAGACGACACGCAGCCTTATGTACTATGGACGTCTATGGTTCTGTATCTGTGTGGAATGTATAATTGACACGGGAATATAATGCCTGTAATCACCTTTACCATGTGACTGGGGAATATAATGCCTGTAATCACCTTTACCATGTGACAGGGTGGACTGACTCAATACCTTTACCATGTGACTTGGGAATATAATGCCTGTAATCACCTTTACCATGTGACAGGGTGGACTGACTCAATACCTTTACCATGTGACAGGGTGGACTGACTCAATACCTTTACCATGTGACTTGGGAATATAATGCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617551 True 497 lncRNA 0.44 2 2544201 2544731

Neighbor

gene id symbol gene type direction distance location
triqk triqk coding upstream 289082 2209019 ~ 2255119 (+)
LOC118946536 NA coding upstream 650249 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 692951 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 719083 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 904628 1600350 ~ 1639573 (+)
pip4p2 LOC106570754 coding downstream 221954 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 271745 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 339197 2883928 ~ 2886784 (+)
angpt2b LOC106570762 coding downstream 385413 2930144 ~ 2992088 (+)
LOC118946537 NA coding downstream 615487 3160218 ~ 3181800 (+)
G2288912 NA non-coding upstream 2286 2541526 ~ 2541915 (+)
G2288898 NA non-coding upstream 30462 2513503 ~ 2513739 (+)
G2288839 NA non-coding upstream 89043 2454939 ~ 2455158 (+)
G2288834 NA non-coding upstream 92435 2451034 ~ 2451766 (+)
G2288827 NA non-coding upstream 100849 2442906 ~ 2443352 (+)
G2288926 NA non-coding downstream 22436 2567167 ~ 2568691 (+)
G2288933 NA non-coding downstream 34885 2579616 ~ 2581380 (+)
G2288979 NA non-coding downstream 131973 2676704 ~ 2677499 (+)
G2289004 NA non-coding downstream 229753 2774484 ~ 2776139 (+)
G2289008 NA non-coding downstream 241086 2785817 ~ 2787193 (+)
G2288814 NA other upstream 162806 2380447 ~ 2381395 (+)
G2288669 NA other upstream 220019 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1270031 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2056540 486793 ~ 487661 (+)
G2289325 NA other downstream 515711 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1904158 4448889 ~ 4449571 (+)
G2290455 NA other downstream 2002173 4546904 ~ 4548844 (+)
smim12 smim12 other downstream 2469925 5014549 ~ 5018314 (+)
dlgap3 dlgap3 other downstream 2839920 5113201 ~ 5412625 (+)

Expression


Co-expression Network