G2288926


Basic Information

Item Value
gene id G2288926
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2567167 ~ 2568691 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617563
CTACCGAGCCCCGatcccaactgactacgtctacactgttctctgccgagccctgaccccaactgactacgtctacactgttctctacCGAGCCCCGatcccaactgactacgtctacactgttctctgccgagccctgaccccaactgactacgtctacactgttctctgccgagccccgatcccaactgactacgtctacgctgttctctgccgagccccgatcccaactgactacgtctacactgttctctgccgagccctgaccccaactgactacgtctacgctgttctctgccgagccccgaccccaactgactacgtctacgctgTTCTCTGCCTAGCCCCGatcccaactgactacgtctacgctgttctctgccgagccccaaccccaactgactacgtctacactgttctctgccgagccctgaccccaactgactacgtctacactgttctctaccgagccccgaccccaactgactacgtctacgctgttctctaccgagccccg

Function

NR:

description
PREDICTED: hyphally regulated cell wall protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617563 True 517 lncRNA 0.58 2 2567167 2568691

Neighbor

gene id symbol gene type direction distance location
triqk triqk coding upstream 312048 2209019 ~ 2255119 (+)
LOC118946536 NA coding upstream 673215 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 715917 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 742049 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 927594 1600350 ~ 1639573 (+)
pip4p2 LOC106570754 coding downstream 197994 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 247785 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 315237 2883928 ~ 2886784 (+)
angpt2b LOC106570762 coding downstream 361453 2930144 ~ 2992088 (+)
LOC118946537 NA coding downstream 591527 3160218 ~ 3181800 (+)
G2288915 NA non-coding upstream 22436 2544201 ~ 2544731 (+)
G2288912 NA non-coding upstream 25252 2541526 ~ 2541915 (+)
G2288898 NA non-coding upstream 53428 2513503 ~ 2513739 (+)
G2288839 NA non-coding upstream 112009 2454939 ~ 2455158 (+)
G2288834 NA non-coding upstream 115401 2451034 ~ 2451766 (+)
G2288933 NA non-coding downstream 10925 2579616 ~ 2581380 (+)
G2288979 NA non-coding downstream 108013 2676704 ~ 2677499 (+)
G2289004 NA non-coding downstream 205793 2774484 ~ 2776139 (+)
G2289008 NA non-coding downstream 217126 2785817 ~ 2787193 (+)
G2289010 NA non-coding downstream 220111 2788802 ~ 2789228 (+)
G2288814 NA other upstream 185772 2380447 ~ 2381395 (+)
G2288669 NA other upstream 242985 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1292997 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2079506 486793 ~ 487661 (+)
G2289325 NA other downstream 491751 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1880198 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1978213 4546904 ~ 4548844 (+)
smim12 smim12 other downstream 2445965 5014549 ~ 5018314 (+)
dlgap3 dlgap3 other downstream 2815960 5113201 ~ 5412625 (+)

Expression


Co-expression Network