G2289040


Basic Information

Item Value
gene id G2289040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2834779 ~ 2835420 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617706
TGTTTGTTCACATGCTCAGCCGAACACTGGGCCCTATTTAATCACAATGGGTTAGGTCTACAGGGTCCTAACTCTGGGCCCTATTTAATCACAATGGGTTAGGTCTACAGGGTCCTAACTCTGGGCCCTATTTAATCACAATGGGTTAGGTCTACAGGGTCCTACCTCTGGGCCCTATTTAATCACAATGGGTTAGGTCTACAGGGTCTTAACTGGGCCCTATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617706 True 225 lncRNA 0.48 2 2834779 2835420

Neighbor

gene id symbol gene type direction distance location
pip4p2 LOC106570754 coding upstream 34587 2766685 ~ 2800192 (+)
cbfa2t2 runx1t1 coding upstream 148747 2525059 ~ 2686032 (+)
triqk triqk coding upstream 579660 2209019 ~ 2255119 (+)
LOC118946536 NA coding upstream 940827 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 983529 1849460 ~ 1851250 (+)
LOC110487826 znf519 coding downstream 48508 2883928 ~ 2886784 (+)
angpt2b LOC106570762 coding downstream 94724 2930144 ~ 2992088 (+)
LOC118946537 NA coding downstream 324798 3160218 ~ 3181800 (+)
pef1 pef1 coding downstream 2167558 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 2179129 5014549 ~ 5018314 (+)
G2289029 NA non-coding upstream 12626 2821890 ~ 2822153 (+)
G2289010 NA non-coding upstream 45551 2788802 ~ 2789228 (+)
G2289008 NA non-coding upstream 47586 2785817 ~ 2787193 (+)
G2289004 NA non-coding upstream 58640 2774484 ~ 2776139 (+)
G2288979 NA non-coding upstream 157280 2676704 ~ 2677499 (+)
G2289026 NA non-coding downstream 3697 2839117 ~ 2839718 (+)
G2289032 NA non-coding downstream 42373 2877793 ~ 2879143 (+)
G2289049 NA non-coding downstream 58227 2893647 ~ 2902038 (+)
G2289054 NA non-coding downstream 73567 2908987 ~ 2910020 (+)
G2289249 NA non-coding downstream 92161 2927581 ~ 2927929 (+)
G2288814 NA other upstream 453384 2380447 ~ 2381395 (+)
G2288669 NA other upstream 510597 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1560609 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2347118 486793 ~ 487661 (+)
G2289325 NA other downstream 225022 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1613469 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1711484 4546904 ~ 4548844 (+)
dlgap3 dlgap3 other downstream 2549231 5113201 ~ 5412625 (+)

Expression


Co-expression Network