G2289054


Basic Information

Item Value
gene id G2289054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2908987 ~ 2910020 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617731
caaccatggtatttcctgtcccaggtagttggacatgttcaaccatggtatttcctgtcccaggtagttggacatgttcaaccatggtatttcctgttccaggtagttggacatgttatatcgttgttgttagttgttgttggTCATCAGGGTAGACCTtgatctgttggtgacagtaggtcatctgatctgttggggacagtaggtcatctgaactgttggggacagtaggtcatctgaactgttggtgacagtaggtaatctgatctgttggtgacagtaggccatctgatctgttggtgacagtaggtcatctgatctgttggggacagtaggCCACCTGGGTAGACCCtgatctgttggtgacagtaggtcatctgatctgttggggacagtaggtcatctgggtagaccctgatctgttggtgacagtaggtcatctgatctgttggtgacagtaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617731 True 463 lncRNA 0.48 4 2908987 2910020

Neighbor

gene id symbol gene type direction distance location
LOC110487826 znf519 coding upstream 22203 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 63421 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 108795 2766685 ~ 2800192 (+)
cbfa2t2 runx1t1 coding upstream 222955 2525059 ~ 2686032 (+)
triqk triqk coding upstream 653868 2209019 ~ 2255119 (+)
angpt2b LOC106570762 coding downstream 20124 2930144 ~ 2992088 (+)
LOC118946537 NA coding downstream 250198 3160218 ~ 3181800 (+)
pef1 pef1 coding downstream 2092958 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 2104529 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2385789 5113201 ~ 5412625 (+)
G2289049 NA non-coding upstream 6949 2893647 ~ 2902038 (+)
G2289032 NA non-coding upstream 29844 2877793 ~ 2879143 (+)
G2289026 NA non-coding upstream 69269 2839117 ~ 2839718 (+)
G2289040 NA non-coding upstream 73567 2834779 ~ 2835420 (+)
G2289029 NA non-coding upstream 86834 2821890 ~ 2822153 (+)
G2289249 NA non-coding downstream 17561 2927581 ~ 2927929 (+)
G2289256 NA non-coding downstream 21138 2931158 ~ 2931368 (+)
G2289257 NA non-coding downstream 21357 2931377 ~ 2931593 (+)
G2289260 NA non-coding downstream 30383 2940403 ~ 2940634 (+)
G2289261 NA non-coding downstream 32493 2942513 ~ 2942843 (+)
G2288814 NA other upstream 527592 2380447 ~ 2381395 (+)
G2288669 NA other upstream 584805 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1634817 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2421326 486793 ~ 487661 (+)
G2289325 NA other downstream 150422 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1538869 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1636884 4546904 ~ 4548844 (+)

Expression


Co-expression Network