G2289260


Basic Information

Item Value
gene id G2289260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2940403 ~ 2940634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617986
gttattccctgtatatctctctctcctgaccgtattcctgttattccctgtatatctctctctactgtccatattcctggtattccctgtatatctctctctcctgaccgtattcctggtattccctgtatatctctctctactgtccatattactggtattccctgtatatctctctctcctgaccgtattcctggtattccctgtatatctctctctactgtccctattc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106598056 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617986 True 232 lncRNA 0.43 1 2940403 2940634

Neighbor

gene id symbol gene type direction distance location
LOC110487826 znf519 coding upstream 53619 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 94837 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 140211 2766685 ~ 2800192 (+)
cbfa2t2 runx1t1 coding upstream 254371 2525059 ~ 2686032 (+)
triqk triqk coding upstream 685284 2209019 ~ 2255119 (+)
LOC118946537 NA coding downstream 219584 3160218 ~ 3181800 (+)
pef1 pef1 coding downstream 2062344 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 2073915 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2355175 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2568367 5509001 ~ 5525069 (+)
G2289257 NA non-coding upstream 8810 2931377 ~ 2931593 (+)
G2289256 NA non-coding upstream 9035 2931158 ~ 2931368 (+)
G2289249 NA non-coding upstream 12474 2927581 ~ 2927929 (+)
G2289054 NA non-coding upstream 30383 2908987 ~ 2910020 (+)
G2289049 NA non-coding upstream 38365 2893647 ~ 2902038 (+)
G2289261 NA non-coding downstream 1879 2942513 ~ 2942843 (+)
G2289255 NA non-coding downstream 40675 2981309 ~ 2982463 (+)
G2289273 NA non-coding downstream 47426 2988060 ~ 2988400 (+)
G2289274 NA non-coding downstream 48374 2989008 ~ 2989246 (+)
G2289297 NA non-coding downstream 54909 2995543 ~ 2995768 (+)
G2288814 NA other upstream 559008 2380447 ~ 2381395 (+)
G2288669 NA other upstream 616221 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1666233 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2452742 486793 ~ 487661 (+)
G2289325 NA other downstream 119808 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1508255 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1606270 4546904 ~ 4548844 (+)

Expression


Co-expression Network