G2289261


Basic Information

Item Value
gene id G2289261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2942513 ~ 2942843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2617987
cctgtatatctctctctactgtccatactCCTGGTATtccctatatatctctctctcctgaccgtattcctggtattccctgtatatctctctctactgtccatactcctggtattccctgtatatctctctctcctgaccgtattcctggtattccctgtatatctctctctcctgaccgtattcctggtattccctgtatatctctctctactgtccatattcctggtattccctgtatatctctctctcctgaccgtattcctggtattccctgtatatctctctctactttccatattcctggtattccctgtatatctctctctcc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106598056 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2617987 True 331 lncRNA 0.44 1 2942513 2942843

Neighbor

gene id symbol gene type direction distance location
LOC110487826 znf519 coding upstream 55729 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 96947 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 142321 2766685 ~ 2800192 (+)
cbfa2t2 runx1t1 coding upstream 256481 2525059 ~ 2686032 (+)
triqk triqk coding upstream 687394 2209019 ~ 2255119 (+)
LOC118946537 NA coding downstream 217375 3160218 ~ 3181800 (+)
pef1 pef1 coding downstream 2060135 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 2071706 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2352966 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2566158 5509001 ~ 5525069 (+)
G2289260 NA non-coding upstream 1879 2940403 ~ 2940634 (+)
G2289257 NA non-coding upstream 10920 2931377 ~ 2931593 (+)
G2289256 NA non-coding upstream 11145 2931158 ~ 2931368 (+)
G2289249 NA non-coding upstream 14584 2927581 ~ 2927929 (+)
G2289054 NA non-coding upstream 32493 2908987 ~ 2910020 (+)
G2289255 NA non-coding downstream 38466 2981309 ~ 2982463 (+)
G2289273 NA non-coding downstream 45217 2988060 ~ 2988400 (+)
G2289274 NA non-coding downstream 46165 2989008 ~ 2989246 (+)
G2289297 NA non-coding downstream 52700 2995543 ~ 2995768 (+)
G2289311 NA non-coding downstream 70659 3013502 ~ 3013937 (+)
G2288814 NA other upstream 561118 2380447 ~ 2381395 (+)
G2288669 NA other upstream 618331 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1668343 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2454852 486793 ~ 487661 (+)
G2289325 NA other downstream 117599 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1506046 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1604061 4546904 ~ 4548844 (+)

Expression


Co-expression Network