G2289273


Basic Information

Item Value
gene id G2289273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2988060 ~ 2988400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618001
aatgaggagtccttagaggtaggtgtttagtcccagggtccttagcttagtgatgagcttggagggcattatggtgttgaacactgagctgtagtcaatgaacagcattctcatgtaggtgttccttttgtccaggtgggaaagggcagtgcggagtgcaatagagattgcatcatctgtggatctgttggggcggtgtgTAAATTGGAGTGGAtacagggtgtctgggatgatggtgttgatgtgagccatgaccagcctttcatagCATTTCATGCTACATATGTGAGTGCTACAAGGCAATagccatttaggcaggttacttttgcattcttggacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618001 True 341 lncRNA 0.47 1 2988060 2988400

Neighbor

gene id symbol gene type direction distance location
LOC110487826 znf519 coding upstream 101276 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 142494 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 187868 2766685 ~ 2800192 (+)
cbfa2t2 runx1t1 coding upstream 302028 2525059 ~ 2686032 (+)
triqk triqk coding upstream 732941 2209019 ~ 2255119 (+)
LOC118946537 NA coding downstream 171818 3160218 ~ 3181800 (+)
pef1 pef1 coding downstream 2014578 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 2026149 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2307409 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2520601 5509001 ~ 5525069 (+)
G2289255 NA non-coding upstream 5597 2981309 ~ 2982463 (+)
G2289261 NA non-coding upstream 45217 2942513 ~ 2942843 (+)
G2289260 NA non-coding upstream 47426 2940403 ~ 2940634 (+)
G2289257 NA non-coding upstream 56467 2931377 ~ 2931593 (+)
G2289256 NA non-coding upstream 56692 2931158 ~ 2931368 (+)
G2289274 NA non-coding downstream 608 2989008 ~ 2989246 (+)
G2289297 NA non-coding downstream 7143 2995543 ~ 2995768 (+)
G2289311 NA non-coding downstream 25102 3013502 ~ 3013937 (+)
G2289332 NA non-coding downstream 145599 3133999 ~ 3134204 (+)
G2289374 NA non-coding downstream 190337 3178737 ~ 3179016 (+)
G2288814 NA other upstream 606665 2380447 ~ 2381395 (+)
G2288669 NA other upstream 663878 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1713890 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2500399 486793 ~ 487661 (+)
G2289325 NA other downstream 72042 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1460489 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1558504 4546904 ~ 4548844 (+)

Expression


Co-expression Network