G2289297


Basic Information

Item Value
gene id G2289297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2995543 ~ 2995768 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618034
GCCTATTCTCTGTTCCCTATTCTCTGTTCCCTATTCCCTGTTCCCTATTCCCTGTTCCCTATTCCCTGTTCCCTATTCCCTGTTCCCTATTCCCTGTTCCATATTCCCTGTTCTCTATTCCCTGTTGCCTATTCTCTGTTCCCTATTCTCTGTTCCCTATTCCCTGTTCCCTATTCCCTGTTCCCTATTCcctgttccctattccctattcagggtttcatagggc

Function

NR:

description
PREDICTED: putative proline-rich protein 21

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618034 True 226 lncRNA 0.47 1 2995543 2995768

Neighbor

gene id symbol gene type direction distance location
angpt2b LOC106570762 coding upstream 3455 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 108759 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 149977 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 195351 2766685 ~ 2800192 (+)
cbfa2t2 runx1t1 coding upstream 309511 2525059 ~ 2686032 (+)
LOC118946537 NA coding downstream 164450 3160218 ~ 3181800 (+)
pef1 pef1 coding downstream 2007210 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 2018781 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2300041 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2513233 5509001 ~ 5525069 (+)
G2289274 NA non-coding upstream 6297 2989008 ~ 2989246 (+)
G2289273 NA non-coding upstream 7143 2988060 ~ 2988400 (+)
G2289255 NA non-coding upstream 13080 2981309 ~ 2982463 (+)
G2289261 NA non-coding upstream 52700 2942513 ~ 2942843 (+)
G2289260 NA non-coding upstream 54909 2940403 ~ 2940634 (+)
G2289311 NA non-coding downstream 17734 3013502 ~ 3013937 (+)
G2289332 NA non-coding downstream 138231 3133999 ~ 3134204 (+)
G2289374 NA non-coding downstream 182969 3178737 ~ 3179016 (+)
G2289390 NA non-coding downstream 201060 3196828 ~ 3197301 (+)
G2289392 NA non-coding downstream 201867 3197635 ~ 3197987 (+)
G2288814 NA other upstream 614148 2380447 ~ 2381395 (+)
G2288669 NA other upstream 671361 2321874 ~ 2324182 (+)
triqk triqk other upstream 740470 2209019 ~ 2255119 (+)
G2287973 NA other upstream 1721373 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2507882 486793 ~ 487661 (+)
G2289325 NA other downstream 64674 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1453121 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1551136 4546904 ~ 4548844 (+)

Expression


Co-expression Network