G2289311


Basic Information

Item Value
gene id G2289311
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 3013502 ~ 3013937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618048
atagtagagagaatgatttatttcagcttttatttctttcatcacattcccagtgggtcagaagtttgcatacactcaattagtatttggtagcattgcctttaaattgtttaacttgggtcaaatgtttcaggtgcCTTCCaaaaccttcccacaataagttgggtgaatttttgcccattttgcaagttcctatgccttcctactagatgtcaacagtctttagaaattttttcaggcttgtattcttataaatgagggagtaagagcagtctgaattagtggaccctgccgtgtcacagagcgtTTTCATAAGTGCGAccagagagagtgcctttcttgtttaccttttatattgatgacgttattgtccggtttaaatattatagatcatttaggctaaaaacaacctgaggattgaatataaacatcgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618048 True 436 lncRNA 0.36 1 3013502 3013937

Neighbor

gene id symbol gene type direction distance location
angpt2b LOC106570762 coding upstream 21414 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 126718 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 167936 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 213310 2766685 ~ 2800192 (+)
cbfa2t2 runx1t1 coding upstream 327470 2525059 ~ 2686032 (+)
LOC118946537 NA coding downstream 146281 3160218 ~ 3181800 (+)
pef1 pef1 coding downstream 1989041 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 2000612 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2281872 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2495064 5509001 ~ 5525069 (+)
G2289297 NA non-coding upstream 17734 2995543 ~ 2995768 (+)
G2289274 NA non-coding upstream 24256 2989008 ~ 2989246 (+)
G2289273 NA non-coding upstream 25102 2988060 ~ 2988400 (+)
G2289255 NA non-coding upstream 31039 2981309 ~ 2982463 (+)
G2289261 NA non-coding upstream 70659 2942513 ~ 2942843 (+)
G2289332 NA non-coding downstream 120062 3133999 ~ 3134204 (+)
G2289374 NA non-coding downstream 164800 3178737 ~ 3179016 (+)
G2289390 NA non-coding downstream 182891 3196828 ~ 3197301 (+)
G2289392 NA non-coding downstream 183698 3197635 ~ 3197987 (+)
G2289431 NA non-coding downstream 231038 3244975 ~ 3249937 (+)
G2288814 NA other upstream 632107 2380447 ~ 2381395 (+)
G2288669 NA other upstream 689320 2321874 ~ 2324182 (+)
triqk triqk other upstream 758429 2209019 ~ 2255119 (+)
G2287973 NA other upstream 1739332 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2525841 486793 ~ 487661 (+)
G2289325 NA other downstream 46505 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1434952 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1532967 4546904 ~ 4548844 (+)

Expression


Co-expression Network