G2289390


Basic Information

Item Value
gene id G2289390
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 3196828 ~ 3197301 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618131
GCAAAAAAATGatgatgatacagtcttatactcaactGTCCCCTCCCCAGATTTTGTTTTAAACTCTCAACAACAAAGTGACCcaacccatcccgttagcgggatcattttcgtcaacatccgctgaattgcagagcgccaaattcaaattaaattactaaaaatatttaattttcatgaaatcacaagtgcaatatagcaaaacacagtttagcttgttgttaacctgttgcgactctaggggcagtattttcatttttggaaaaaaacgttcccgttttaaacgggatattttgtcagtacaagatgctagaatatgcatataattgacaactttggatagaaaacactctaaagtttccaaaactgtaaagatattgtctgtgagtataacagaactgatgttgcaggcgaaagcctgagaaaaatccaatccggaagtgccccatattttgaaagcgctgcgttccaatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618131 True 474 lncRNA 0.37 1 3196828 3197301

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 15028 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 204740 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 310044 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 351262 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 396636 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 1805677 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 1817248 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2098508 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2311700 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 2394811 5592112 ~ 5615373 (+)
G2289374 NA non-coding upstream 17812 3178737 ~ 3179016 (+)
G2289332 NA non-coding upstream 62624 3133999 ~ 3134204 (+)
G2289311 NA non-coding upstream 182891 3013502 ~ 3013937 (+)
G2289297 NA non-coding upstream 201060 2995543 ~ 2995768 (+)
G2289274 NA non-coding upstream 207582 2989008 ~ 2989246 (+)
G2289392 NA non-coding downstream 334 3197635 ~ 3197987 (+)
G2289431 NA non-coding downstream 47674 3244975 ~ 3249937 (+)
G2289433 NA non-coding downstream 54639 3251940 ~ 3252205 (+)
G2289436 NA non-coding downstream 77382 3274683 ~ 3275184 (+)
G2289440 NA non-coding downstream 81648 3278949 ~ 3279167 (+)
G2289325 NA other upstream 136049 3060442 ~ 3060779 (+)
G2288814 NA other upstream 815433 2380447 ~ 2381395 (+)
G2288669 NA other upstream 872646 2321874 ~ 2324182 (+)
triqk triqk other upstream 941755 2209019 ~ 2255119 (+)
G2287973 NA other upstream 1922658 1273374 ~ 1274170 (+)
G2290395 NA other downstream 1251588 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1349603 4546904 ~ 4548844 (+)
G2291194 NA other downstream 2219531 5416832 ~ 5418238 (+)

Expression


Co-expression Network