G2289440


Basic Information

Item Value
gene id G2289440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 3278949 ~ 3279167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618189
ACATTACACAGATATGATATGACAGTGAGTGAGATGTACTTTTTGTCTTTCTTTAATGATACAttctcatttcattaaaactgGATACAAAACAACAACTAAAACCTCACCACTTCTACAACCGCATATCCCGAAACAACTTTGCCTGAGAAAAAGCAAAAAAAATGAAACACACATTTGGCCTTTTCCTTATTTGAATACCTGTaccccattataaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618189 True 219 lncRNA 0.33 1 3278949 3279167

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 97149 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 286861 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 392165 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 433383 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 478757 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 1723811 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 1735382 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2016642 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2229834 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 2312945 5592112 ~ 5615373 (+)
G2289436 NA non-coding upstream 3765 3274683 ~ 3275184 (+)
G2289433 NA non-coding upstream 26744 3251940 ~ 3252205 (+)
G2289431 NA non-coding upstream 29012 3244975 ~ 3249937 (+)
G2289392 NA non-coding upstream 80962 3197635 ~ 3197987 (+)
G2289390 NA non-coding upstream 81648 3196828 ~ 3197301 (+)
G2289441 NA non-coding downstream 654 3279821 ~ 3280058 (+)
G2289443 NA non-coding downstream 6594 3285761 ~ 3286199 (+)
G2289445 NA non-coding downstream 18068 3297235 ~ 3297451 (+)
G2289454 NA non-coding downstream 40313 3319480 ~ 3319695 (+)
G2289455 NA non-coding downstream 41504 3320671 ~ 3321247 (+)
G2289325 NA other upstream 218170 3060442 ~ 3060779 (+)
G2288814 NA other upstream 897554 2380447 ~ 2381395 (+)
G2288669 NA other upstream 954767 2321874 ~ 2324182 (+)
triqk triqk other upstream 1023876 2209019 ~ 2255119 (+)
G2287973 NA other upstream 2004779 1273374 ~ 1274170 (+)
G2290395 NA other downstream 1169722 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1267737 4546904 ~ 4548844 (+)
G2291194 NA other downstream 2137665 5416832 ~ 5418238 (+)

Expression


Co-expression Network