G2289443


Basic Information

Item Value
gene id G2289443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 3285761 ~ 3286199 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618192
attttataatcaatcctcaggttattTTTCAAATATATAatagataatatatcaaccgtaACTGTCTTTTTCAGtcggagagggaaaggcaatggctgcccaaaTTCTGTTACGcatacaaaacgctgctggcacccggccatacaatgacgcgatgttatctttctcgctcattttttcaaaataaaagcctgaaactatgtctaaagactgttgacaccttgaggaagcgatagaataggaaaaggaatctggttgatatccctttaaatggagcaaaggcaggctatggaacatggagttttcaaaatagaagccacttcttggtttgattttcctcagggtttcgcctgcaatatcagttctgttatgctcacagacaatattttgagagttttggaaactttagagtgttttctatccaatgctaataataata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618192 True 439 lncRNA 0.37 1 3285761 3286199

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 103961 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 293673 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 398977 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 440195 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 485569 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 1716779 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 1728350 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 2009610 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2222802 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 2305913 5592112 ~ 5615373 (+)
G2289441 NA non-coding upstream 5703 3279821 ~ 3280058 (+)
G2289440 NA non-coding upstream 6594 3278949 ~ 3279167 (+)
G2289436 NA non-coding upstream 10577 3274683 ~ 3275184 (+)
G2289433 NA non-coding upstream 33556 3251940 ~ 3252205 (+)
G2289431 NA non-coding upstream 35824 3244975 ~ 3249937 (+)
G2289445 NA non-coding downstream 11036 3297235 ~ 3297451 (+)
G2289454 NA non-coding downstream 33281 3319480 ~ 3319695 (+)
G2289455 NA non-coding downstream 34472 3320671 ~ 3321247 (+)
G2289456 NA non-coding downstream 35285 3321484 ~ 3322831 (+)
G2289457 NA non-coding downstream 36890 3323089 ~ 3323956 (+)
G2289325 NA other upstream 224982 3060442 ~ 3060779 (+)
G2288814 NA other upstream 904366 2380447 ~ 2381395 (+)
G2288669 NA other upstream 961579 2321874 ~ 2324182 (+)
triqk triqk other upstream 1030688 2209019 ~ 2255119 (+)
G2287973 NA other upstream 2011591 1273374 ~ 1274170 (+)
G2290395 NA other downstream 1162690 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1260705 4546904 ~ 4548844 (+)
G2291194 NA other downstream 2130633 5416832 ~ 5418238 (+)

Expression


Co-expression Network