G2289456


Basic Information

Item Value
gene id G2289456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 3321484 ~ 3322831 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618209
gttacagtaatataacactatagttatagtaacagaacactatagttacagtaatataacactagagagATCATACATCCATTGAGATAGCATCAGAGTTATCATCAGAGAACAGTtactacagagatcatacatctaTAGAGATTATACATCCATATAGATAGCATCAGAGTTACCATCAGAGAACAGTtactacagagatcatacatccatagAGATTATACATCCATATAGATATCATCAGAGTTATCATCAGAGAACAGTtactacagagatcatacattcaTAGAGATTATACGTCCATATAGATTGCATCAGAGTTATCAGAGAACAACTTTCAATTAGATACCAAACATGGATACTATGGTATTATTATATCACAATAGTCAGTCCTCTGAATAGTGTAACAGTGTTTCACCTgtatttgtgattgtctccacctacCTCCAGGTTTCACCCGTCTTCCCCATTATTCCCAGGGTATTTattcctgtgttctctgtttgtctgttgccagttcgtcttgtcttgtcaagtcATCCCGGAGTCCagcttcttcactgttgatgttgagactggacagaggaactctgcctagacggacagcatccctgagtcgcctcttcactgttgatgttgagactggacagaggaactctgcctagacggacagcatccctgagtcgcctcttcactgttgatgttgagactggacagaggaactctgcctagaaggccagcatcacagagtctcctcttcactgttgatgttgagactggacagaggaactctgcctagacggacagcatccctgagtcgcctcttcactgttgatgttgagactggacagaggaactagattgccaacatcccggagtccagcttcttcactgttgacgttgagactggtgttttgtggtactatgtgaaaaaggtcaaggggtctgaatcatttCTCAAAGGATTGTGTCTGCATCCagtagagaaagatggagagggggaagaaaccgagagagaatcaggtgtctgtctgtgtgattgtgtctGCATCCAGTAGAGACAGATGGGGGTGAGAGggggaagaaaccgagagagaatCAGGTGTATGTCTGTGTGATTGTGAGTGCATATGTGatcgtgtgtgcatgtgtaaatgtgcataagtgtgtgtgtgtgtcagtgtgtccaT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618209 True 1190 lncRNA 0.43 2 3321484 3322831

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 139684 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 329396 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 434700 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 475918 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 521292 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 1680147 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 1691718 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 1972978 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2186170 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 2269281 5592112 ~ 5615373 (+)
G2289455 NA non-coding upstream 237 3320671 ~ 3321247 (+)
G2289454 NA non-coding upstream 1789 3319480 ~ 3319695 (+)
G2289445 NA non-coding upstream 24033 3297235 ~ 3297451 (+)
G2289443 NA non-coding upstream 35285 3285761 ~ 3286199 (+)
G2289441 NA non-coding upstream 41426 3279821 ~ 3280058 (+)
G2289457 NA non-coding downstream 258 3323089 ~ 3323956 (+)
G2289458 NA non-coding downstream 2203 3325034 ~ 3325991 (+)
G2289462 NA non-coding downstream 15829 3338660 ~ 3338903 (+)
G2289463 NA non-coding downstream 19482 3342313 ~ 3342561 (+)
G2289464 NA non-coding downstream 27113 3349944 ~ 3350228 (+)
G2289325 NA other upstream 260705 3060442 ~ 3060779 (+)
G2288814 NA other upstream 940089 2380447 ~ 2381395 (+)
G2288669 NA other upstream 997302 2321874 ~ 2324182 (+)
triqk triqk other upstream 1066411 2209019 ~ 2255119 (+)
G2287973 NA other upstream 2047314 1273374 ~ 1274170 (+)
G2290395 NA other downstream 1126058 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1224073 4546904 ~ 4548844 (+)
G2291194 NA other downstream 2094001 5416832 ~ 5418238 (+)

Expression


Co-expression Network