G2289462


Basic Information

Item Value
gene id G2289462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 3338660 ~ 3338903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618217
cttttaccaaatagggctatcttctgtatacccccataccttgtcacaacacaactgattggctcaaatgcattaagaaggaaagaaattccacaaattaactattaacaaggcacacctgttaattgaaatgcattccaggtgaatacctcatgaatttggttgagagaatggcaagagtgtgcatagctgtcatcaaggcaaagggtggctactttgaagactcaAATATATAATAACATTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618217 True 244 lncRNA 0.38 1 3338660 3338903

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 156860 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 346572 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 451876 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 493094 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 538468 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 1664075 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 1675646 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 1956906 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2170098 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 2253209 5592112 ~ 5615373 (+)
G2289458 NA non-coding upstream 12669 3325034 ~ 3325991 (+)
G2289457 NA non-coding upstream 14704 3323089 ~ 3323956 (+)
G2289456 NA non-coding upstream 15829 3321484 ~ 3322831 (+)
G2289455 NA non-coding upstream 17413 3320671 ~ 3321247 (+)
G2289454 NA non-coding upstream 18965 3319480 ~ 3319695 (+)
G2289463 NA non-coding downstream 3410 3342313 ~ 3342561 (+)
G2289464 NA non-coding downstream 11041 3349944 ~ 3350228 (+)
G2289509 NA non-coding downstream 41412 3380315 ~ 3380538 (+)
G2289537 NA non-coding downstream 78102 3417005 ~ 3417297 (+)
G2289538 NA non-coding downstream 78514 3417417 ~ 3417617 (+)
G2289325 NA other upstream 277881 3060442 ~ 3060779 (+)
G2288814 NA other upstream 957265 2380447 ~ 2381395 (+)
G2288669 NA other upstream 1014478 2321874 ~ 2324182 (+)
triqk triqk other upstream 1083587 2209019 ~ 2255119 (+)
G2287973 NA other upstream 2064490 1273374 ~ 1274170 (+)
G2290395 NA other downstream 1109986 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1208001 4546904 ~ 4548844 (+)
G2291194 NA other downstream 2077929 5416832 ~ 5418238 (+)

Expression


Co-expression Network