G2289464



Basic Information


Item Value
gene id G2289464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 3349944 ~ 3350228 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2618219
gaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggccgcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggt

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU2618219 True 285 lncRNA 0.46 1 3349944 3350228

Neighbor


gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 168144 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 357856 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 463160 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 504378 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 549752 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 1652750 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 1664321 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 1945581 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 2158773 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 2241884 5592112 ~ 5615373 (+)
G2289463 NA non-coding upstream 7383 3342313 ~ 3342561 (+)
G2289462 NA non-coding upstream 11041 3338660 ~ 3338903 (+)
G2289458 NA non-coding upstream 23953 3325034 ~ 3325991 (+)
G2289457 NA non-coding upstream 25988 3323089 ~ 3323956 (+)
G2289456 NA non-coding upstream 27113 3321484 ~ 3322831 (+)
G2289509 NA non-coding downstream 30087 3380315 ~ 3380538 (+)
G2289537 NA non-coding downstream 66777 3417005 ~ 3417297 (+)
G2289538 NA non-coding downstream 67189 3417417 ~ 3417617 (+)
G2289539 NA non-coding downstream 67691 3417919 ~ 3418934 (+)
G2289546 NA non-coding downstream 92643 3442871 ~ 3443465 (+)
G2289325 NA other upstream 289165 3060442 ~ 3060779 (+)
G2288814 NA other upstream 968549 2380447 ~ 2381395 (+)
G2288669 NA other upstream 1025762 2321874 ~ 2324182 (+)
triqk triqk other upstream 1094871 2209019 ~ 2255119 (+)
G2287973 NA other upstream 2075774 1273374 ~ 1274170 (+)
G2290395 NA other downstream 1098661 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1196676 4546904 ~ 4548844 (+)
G2291194 NA other downstream 2066604 5416832 ~ 5418238 (+)

Expression



Co-expression Network