G2289644


Basic Information

Item Value
gene id G2289644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 3662409 ~ 3662853 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618435
tgttgaagaccttcttaagttggtgatagaagtaccaagtcatcagcatatagcaggtatttcacctctgtgttaaatagtgtgagtcctggggctgcagtcatcagcatatagcaggtatttcacctctgtgttaaatagtgtgagtcctggggctgcagtcatcagcatatagcaggtatttcacctctgtgttaaATAGTGTCCTG

Function

NR:

description
LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618435 True 209 lncRNA 0.43 3 3662409 3662853

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 480609 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 670321 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 775625 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 816843 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 862217 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 1340125 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 1351696 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 1632956 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 1846148 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 1929259 5592112 ~ 5615373 (+)
G2289635 NA non-coding upstream 26283 3635698 ~ 3636126 (+)
G2289607 NA non-coding upstream 80507 3581556 ~ 3581902 (+)
G2289575 NA non-coding upstream 146426 3503554 ~ 3515983 (+)
G2289564 NA non-coding upstream 177538 3483859 ~ 3484871 (+)
G2289548 NA non-coding upstream 214087 3447080 ~ 3448322 (+)
G2289663 NA non-coding downstream 49478 3712331 ~ 3758731 (+)
G2289671 NA non-coding downstream 66187 3729040 ~ 3730528 (+)
G2289687 NA non-coding downstream 101310 3764163 ~ 3764451 (+)
G2289691 NA non-coding downstream 141919 3804772 ~ 3805502 (+)
G2289693 NA non-coding downstream 147719 3810572 ~ 3812722 (+)
G2289325 NA other upstream 601630 3060442 ~ 3060779 (+)
G2288814 NA other upstream 1281014 2380447 ~ 2381395 (+)
G2288669 NA other upstream 1338227 2321874 ~ 2324182 (+)
triqk triqk other upstream 1407336 2209019 ~ 2255119 (+)
G2287973 NA other upstream 2388239 1273374 ~ 1274170 (+)
G2290395 NA other downstream 786036 4448889 ~ 4449571 (+)
G2290455 NA other downstream 884051 4546904 ~ 4548844 (+)
G2291194 NA other downstream 1753979 5416832 ~ 5418238 (+)

Expression


Co-expression Network