G2289862


Basic Information

Item Value
gene id G2289862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4144543 ~ 4144832 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618694
gaacggatgatctacgcatgtgtggttcccaccgtgaagcatggaggaggaggtgtgatgtctttgtgagacgcagagtaggtgaacagatgatctctgcatgtgtggttcccaccgtgaagcatggaggaggaggtgtgatgtctttgtgagacgcagagtaggtgaacggatgatctctccatgtgtggttcccaccgtgaagca
>TU2618695
gaacggatgatctacgcatgtgtggttcccaccgtgaagcatggaggaggaggtgtgatgtctttgtgagacgcagagtaggtgaacggatgatctacgcatgtgtggttcccaccgtgaagcatggaggaggaggtgtgatgtctttgtgagacgcagagtaggtgaacggatgatctctccatgtgtggttcccaccgtgaagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618694 False 207 lncRNA 0.53 2 4144543 4144832
TU2618695 True 207 lncRNA 0.53 2 4144543 4144832

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 962743 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1152455 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1257759 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1298977 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1344351 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 858146 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 869717 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 1150977 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 1364169 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 1447280 5592112 ~ 5615373 (+)
G2289858 NA non-coding upstream 4825 4136035 ~ 4139718 (+)
G2289843 NA non-coding upstream 32194 4110998 ~ 4112349 (+)
G2289821 NA non-coding upstream 67308 4071503 ~ 4077235 (+)
G2289820 NA non-coding upstream 73453 4070727 ~ 4071090 (+)
G2289818 NA non-coding upstream 78456 4065690 ~ 4066087 (+)
G2289864 NA non-coding downstream 7820 4152652 ~ 4153169 (+)
G2289875 NA non-coding downstream 18868 4163700 ~ 4164468 (+)
G2289878 NA non-coding downstream 24934 4169766 ~ 4170197 (+)
G2289880 NA non-coding downstream 27594 4172426 ~ 4173697 (+)
G2290320 NA non-coding downstream 178192 4323024 ~ 4323285 (+)
G2289325 NA other upstream 1083764 3060442 ~ 3060779 (+)
G2288814 NA other upstream 1763148 2380447 ~ 2381395 (+)
G2288669 NA other upstream 1820361 2321874 ~ 2324182 (+)
triqk triqk other upstream 1889470 2209019 ~ 2255119 (+)
G2287973 NA other upstream 2870373 1273374 ~ 1274170 (+)
G2290395 NA other downstream 304057 4448889 ~ 4449571 (+)
G2290455 NA other downstream 402072 4546904 ~ 4548844 (+)
G2291194 NA other downstream 1272000 5416832 ~ 5418238 (+)

Expression


Co-expression Network