G2289880


Basic Information

Item Value
gene id G2289880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4172426 ~ 4173697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2618715
tctggactggttctgtgttgtgttgactagtcctgtattactctggactggttctgtgttgtgttgactagtcctgtattactctggactggttccatgttgtgttgactagtcctgtattactctggactggttctgtgttgtgttgactagtcctgtattactctggagaGTGGaatgttgtgttgactagtcctgtattactctggactggttctgtgttgtgttgactagtcctgtaatactctggactggttctgtgttgtgttgactagtcctgtattactctggactggttctgtgttgtgttgactagtcctgtattactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2618715 True 329 lncRNA 0.44 2 4172426 4173697

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 990626 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1180338 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1285642 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1326860 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1372234 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 829281 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 840852 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 1122112 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 1335304 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 1418415 5592112 ~ 5615373 (+)
G2289878 NA non-coding upstream 2229 4169766 ~ 4170197 (+)
G2289875 NA non-coding upstream 7958 4163700 ~ 4164468 (+)
G2289864 NA non-coding upstream 19257 4152652 ~ 4153169 (+)
G2289862 NA non-coding upstream 27594 4144543 ~ 4144832 (+)
G2289858 NA non-coding upstream 32708 4136035 ~ 4139718 (+)
G2290320 NA non-coding downstream 149327 4323024 ~ 4323285 (+)
G2290383 NA non-coding downstream 266679 4440376 ~ 4440643 (+)
G2290390 NA non-coding downstream 272823 4446520 ~ 4447093 (+)
G2290397 NA non-coding downstream 277224 4450921 ~ 4459166 (+)
G2290405 NA non-coding downstream 305267 4478964 ~ 4483848 (+)
G2289325 NA other upstream 1111647 3060442 ~ 3060779 (+)
G2288814 NA other upstream 1791031 2380447 ~ 2381395 (+)
G2288669 NA other upstream 1848244 2321874 ~ 2324182 (+)
triqk triqk other upstream 1917353 2209019 ~ 2255119 (+)
G2287973 NA other upstream 2898256 1273374 ~ 1274170 (+)
G2290395 NA other downstream 275192 4448889 ~ 4449571 (+)
G2290455 NA other downstream 373207 4546904 ~ 4548844 (+)
G2291194 NA other downstream 1243135 5416832 ~ 5418238 (+)

Expression


Co-expression Network