G2290383


Basic Information

Item Value
gene id G2290383
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4440376 ~ 4440643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619316
ATAATTACTTGATTATGCTTGTTTTACTCAAAAactagttgtatgagctcagTTCAATGAAGCCTACAGGCCGTAAATAgaaaatagaagttcaaaacttgtaatgttccGAAGAACTTAAGTTGGTAAAAATATCTAACACAACAtcaggtgataatatatgtattattatggatttataatcagctataaagGAACGGCCATTTTGgactggaagcacagaatcaattaacatgaaacaaacacaacaggagggttaatcATATAA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619316 True 268 lncRNA 0.31 1 4440376 4440643

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1258576 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1448288 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1553592 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1594810 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1640184 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 562335 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 573906 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 855166 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 1068358 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 1151469 5592112 ~ 5615373 (+)
G2290320 NA non-coding upstream 117091 4323024 ~ 4323285 (+)
G2289880 NA non-coding upstream 266679 4172426 ~ 4173697 (+)
G2289878 NA non-coding upstream 270179 4169766 ~ 4170197 (+)
G2289875 NA non-coding upstream 275908 4163700 ~ 4164468 (+)
G2289864 NA non-coding upstream 287207 4152652 ~ 4153169 (+)
G2290390 NA non-coding downstream 5877 4446520 ~ 4447093 (+)
G2290397 NA non-coding downstream 10278 4450921 ~ 4459166 (+)
G2290405 NA non-coding downstream 38321 4478964 ~ 4483848 (+)
G2290413 NA non-coding downstream 47725 4488368 ~ 4488576 (+)
G2290415 NA non-coding downstream 52566 4493209 ~ 4493417 (+)
G2289325 NA other upstream 1379597 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2058981 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2116194 2321874 ~ 2324182 (+)
triqk triqk other upstream 2185303 2209019 ~ 2255119 (+)
G2287973 NA other upstream 3166206 1273374 ~ 1274170 (+)
G2290395 NA other downstream 8246 4448889 ~ 4449571 (+)
G2290455 NA other downstream 106261 4546904 ~ 4548844 (+)
G2291194 NA other downstream 976189 5416832 ~ 5418238 (+)

Expression


Co-expression Network