G2290415


Basic Information

Item Value
gene id G2290415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4493209 ~ 4493417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619348
accctattcccaatgggccctggtcaacagtagtgcactatagagggagtgGAACCCTATCCCctctgggctctggtcaaatttagtgcactatagagggagtggaaccctatcccctatgggacctggtcaacagtaatacactatagatggagtggaaccctatcccctatgggacctggtcagcaAGAAATACACTATAGAGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619348 True 209 lncRNA 0.50 1 4493209 4493417

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1311409 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1501121 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1606425 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1647643 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1693017 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 509561 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 521132 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 802392 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 1015584 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 1098695 5592112 ~ 5615373 (+)
G2290413 NA non-coding upstream 4633 4488368 ~ 4488576 (+)
G2290405 NA non-coding upstream 9361 4478964 ~ 4483848 (+)
G2290397 NA non-coding upstream 34043 4450921 ~ 4459166 (+)
G2290390 NA non-coding upstream 46116 4446520 ~ 4447093 (+)
G2290383 NA non-coding upstream 52566 4440376 ~ 4440643 (+)
G2290423 NA non-coding downstream 9258 4502675 ~ 4502996 (+)
G2290425 NA non-coding downstream 14111 4507528 ~ 4507867 (+)
G2290454 NA non-coding downstream 50446 4543863 ~ 4544312 (+)
G2290523 NA non-coding downstream 151789 4645206 ~ 4645666 (+)
G2290571 NA non-coding downstream 173287 4666704 ~ 4666926 (+)
G2290395 NA other upstream 43638 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1432430 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2111814 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2169027 2321874 ~ 2324182 (+)
triqk triqk other upstream 2238136 2209019 ~ 2255119 (+)
G2290455 NA other downstream 53487 4546904 ~ 4548844 (+)
G2291194 NA other downstream 923415 5416832 ~ 5418238 (+)
G2291219 NA other downstream 978146 5471563 ~ 5472153 (+)

Expression


Co-expression Network