G2290425


Basic Information

Item Value
gene id G2290425
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4507528 ~ 4507867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619359
tcagagcagctcacagattactgcacctgtacatagcccacctataatttagcccaaacaactacctctttccctactgtatttaatttatttatttattttgctcctttgcaccccattatttttatttatactttgcacattctcccattgcaaatctaccattccagtgttttacttgctatattgtatttactttgccaccatggcctttttgcctttacctcccttatctcacctcatttgctcacatcgtatatggacttgtttatactgtattattgactgtatgtttgttttactccatgtgtaactctgtgtcgttgtatgtgttgaactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619359 True 340 lncRNA 0.36 1 4507528 4507867

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1325728 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1515440 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1620744 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1661962 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1707336 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 495111 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 506682 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 787942 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 1001134 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 1084245 5592112 ~ 5615373 (+)
G2290423 NA non-coding upstream 4532 4502675 ~ 4502996 (+)
G2290415 NA non-coding upstream 14111 4493209 ~ 4493417 (+)
G2290413 NA non-coding upstream 18952 4488368 ~ 4488576 (+)
G2290405 NA non-coding upstream 23680 4478964 ~ 4483848 (+)
G2290397 NA non-coding upstream 48362 4450921 ~ 4459166 (+)
G2290454 NA non-coding downstream 35996 4543863 ~ 4544312 (+)
G2290523 NA non-coding downstream 137339 4645206 ~ 4645666 (+)
G2290571 NA non-coding downstream 158837 4666704 ~ 4666926 (+)
G2290572 NA non-coding downstream 159649 4667516 ~ 4667752 (+)
G2290576 NA non-coding downstream 165128 4672995 ~ 4673524 (+)
G2290395 NA other upstream 57957 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1446749 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2126133 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2183346 2321874 ~ 2324182 (+)
triqk triqk other upstream 2252455 2209019 ~ 2255119 (+)
G2290455 NA other downstream 39037 4546904 ~ 4548844 (+)
G2291194 NA other downstream 908965 5416832 ~ 5418238 (+)
G2291219 NA other downstream 963696 5471563 ~ 5472153 (+)

Expression


Co-expression Network