G2290455


Basic Information

Item Value
gene id G2290455
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4546904 ~ 4548844 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619392
gtctgtctgtctctctctctctcgctctctagtcTGTGACTAAAAAAAGTGTGGTTTTAATGTTTGATACCTCTGTGTGGCTAGCTAATTGTTCCTGGTTTTAAAAAAATGCTCTTAATATCCTGTGAGCTGCTGTCTTCAATTCCACACTGTCTTCTATTCTCTACtgtcttctattctacactgtctCCTATTCTACACTGTCTTCAATTCTACACTGTCTTCTATTCCACATtgtcttctattctacactgtctcctattctacactgtcttctattctacactgtctcatattctacactgtcttctattctacactgtctCCTATTCTACACTttcttctattctacactgtcttctattctacactgtcGtctattctacactgtctCCTATTCTACACTGTCTTCTATTCTCTACtgtcttctattctacactgtctaatattctacactgtcttctattctacactgtattctattctacactgtcttcactgtcttctattctacactgtcttCTATTCTCTACtgtcttctattctacactgtcttctattctacactgtcttCTATTCTACACtgtcttctattctacactgtcttctattctacactgtcttctattctacactgacttctattctacactgtcttCACCTTCTCCTATTCTacactgtctttactgtcttctATTCCACACTGTCTTCTATTCCACACtgtcttctattctacactgtcttcactgtcttctattctacactgtcttCTATTCTCTGCtgtcttctattctacactgtcttCTATTCCACACTGTCTTCTATTCTCTACTGTCTTCTATTCCACACTGTCTTCTATTCAACACTGTCTTCTATTCCACACTGTCTCCTATTCTACACTGTCTTCAATTCTATACTGTCTTCTATTCCACACTGTCTCCTAATCTACACTGTCTTCAATTCTACACTGTCTTCTATTCCACACTGTCTCCTATTCTACACTGTCTTCTATTCCACACTGTCTCCTATTCTACACTGTCTCCTATTCTCTACTGTCTCCTATTCTACAC
>TU2619393
gtctgtctgtctctctctctctcgctctctagtcTGTGACTAAAAAAAGTGTGGTTTTAATGTTTGATACCTCTGTGTGGCTAGCTAATTGTTCCTGGTTTTAAAAAAATGCTCTTAATATCCTGTGAGCTGCTGTCTTCAATTCCACACTGTCTTCTATTCTCTACtgtcttctattctacactgtctCCTATTCTACACtgtcttctattctacactgtctcctattctacactgtcttctattcTACACTGTCTCCTATTCTACACtgtcttctattctacactgtcttctattctacactgtctCCTATTCTACACTGTCTTCTATTCTCTACtgtcttctattctacactgtctaatattctacactgtcttctattctacactgtattctattctacactgtcttcactgtcttctattctacactgtcttCTATTCTCTACtgtcttctattctacactgtcttctattctacactgtcttCTATTCTACACtgtcttctattctacactgtcttctattctacactgtcttctattctacactgacttctattctacactgtcttCACCTTCTCCTATTCTacactgtctttactgtcttctATTCCACACTGTCTTCTATTCCACACtgtcttctattctacactgtcttcactgtcttctattctacactgtcttCTATTCTCTGCtgtcttctattctacactgtcttCTATTCCACACTGtcttctattctacactgtcttCTATTCCACACtgtcttctattctacactgtcttCTATCCTCTACTGTCTTCTATTCTACATtgtcttctattctacactgtcttCTATTCTCTACTGT
>TU2619394
gtctgtctgtctctctctctctcgctctctagtcTGTGACTAAAAAAAGTGTGGTTTTAATGTTTGATACCTCTGTGTGGCTAGCTAATTGTTCCTGGTTTTAAAAAAATGCTCTTAATATCCTGTGAGCTGCTGTCTTCAATTCCACACTGTCTTCTATTCTCTACtgtcttctattctacactgtctCCTATTCTACACtgtcttctattctacactgtctcctattctacactgtcttctattcTACACTGTCTCCTATTCTACACtgtcttctattctacactgtcttctattctacactgtctCCTATTCTACACtgtcttctattctacactgtcttCTATTCCACACTGtcttctattctacactgtcttCTATTCCACACtgtcttctattctacactgtcttCTATCCTCTACTGTCTTCTATTCTACATtgtcttctattctacactgtcttCTATTCTCTACTGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106590586, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619392 False 1070 TUCP 0.38 3 4546904 4548603
TU2619393 False 852 TUCP 0.37 5 4546904 4548844
TU2619394 True 476 TUCP 0.38 5 4546904 4548844

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1365104 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1554816 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1660120 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1701338 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1746712 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 454134 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 465705 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 746965 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 960157 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 1043268 5592112 ~ 5615373 (+)
G2290454 NA non-coding upstream 2592 4543863 ~ 4544312 (+)
G2290425 NA non-coding upstream 39037 4507528 ~ 4507867 (+)
G2290423 NA non-coding upstream 43908 4502675 ~ 4502996 (+)
G2290415 NA non-coding upstream 53487 4493209 ~ 4493417 (+)
G2290413 NA non-coding upstream 58328 4488368 ~ 4488576 (+)
G2290523 NA non-coding downstream 96362 4645206 ~ 4645666 (+)
G2290571 NA non-coding downstream 117860 4666704 ~ 4666926 (+)
G2290572 NA non-coding downstream 118672 4667516 ~ 4667752 (+)
G2290576 NA non-coding downstream 124151 4672995 ~ 4673524 (+)
G2290601 NA non-coding downstream 150488 4699332 ~ 4699569 (+)
G2290395 NA other upstream 97333 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1486125 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2165509 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2222722 2321874 ~ 2324182 (+)
triqk triqk other upstream 2291831 2209019 ~ 2255119 (+)
G2291194 NA other downstream 867988 5416832 ~ 5418238 (+)
G2291219 NA other downstream 922719 5471563 ~ 5472153 (+)
wipf3 NA other downstream 1175480 5724270 ~ 5749736 (+)

Expression


Co-expression Network