G2290523


Basic Information

Item Value
gene id G2290523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4645206 ~ 4645666 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619472
ATGTGGATGAATGCAGAAAAAGGACAGAATGATTGAATGAATTCCAGGGTAGTTAAGCCTTTCATTGATGTGATTGTGGGGAGTAGCTTTAGAAAAGGAATGGATAGGAAGTAAGGAATTACCAGGTAAAGCTggtgtgttactacagtcttTAGAAAAGGAATGGATAGGAAGTAAGGAATTACCAGGTAAAGCTggtgtgttactac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619472 True 209 lncRNA 0.39 2 4645206 4645666

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1463406 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1653118 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1758422 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1799640 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1845014 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 357312 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 368883 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 650143 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 863335 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 946446 5592112 ~ 5615373 (+)
G2290454 NA non-coding upstream 100894 4543863 ~ 4544312 (+)
G2290425 NA non-coding upstream 137339 4507528 ~ 4507867 (+)
G2290423 NA non-coding upstream 142210 4502675 ~ 4502996 (+)
G2290415 NA non-coding upstream 151789 4493209 ~ 4493417 (+)
G2290413 NA non-coding upstream 156630 4488368 ~ 4488576 (+)
G2290571 NA non-coding downstream 21038 4666704 ~ 4666926 (+)
G2290572 NA non-coding downstream 21850 4667516 ~ 4667752 (+)
G2290576 NA non-coding downstream 27329 4672995 ~ 4673524 (+)
G2290601 NA non-coding downstream 53666 4699332 ~ 4699569 (+)
G2290615 NA non-coding downstream 61654 4707320 ~ 4707870 (+)
G2290455 NA other upstream 96362 4546904 ~ 4548844 (+)
G2290395 NA other upstream 195635 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1584427 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2263811 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2321024 2321874 ~ 2324182 (+)
G2291194 NA other downstream 771166 5416832 ~ 5418238 (+)
G2291219 NA other downstream 825897 5471563 ~ 5472153 (+)
wipf3 NA other downstream 1078658 5724270 ~ 5749736 (+)

Expression


Co-expression Network