G2290572


Basic Information

Item Value
gene id G2290572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4667516 ~ 4667752 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619522
gaacacctctccttcctgagcggtatgacggctgcgtggtcccatggtgtttatacttgcgtactattgtttttgcagattaacatggtaccttcaggcgtttggaaattgctctcaatgatgaaccagacatgtggaggtctacaattttttttctgaggtcttggctgatttctttagatttttctaTGATGTCaaccaaagaggcactgagtttgaaggtaggccttgaattac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619522 True 237 lncRNA 0.43 1 4667516 4667752

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1485716 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1675428 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1780732 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1821950 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1867324 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 335226 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 346797 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 628057 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 841249 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 924360 5592112 ~ 5615373 (+)
G2290571 NA non-coding upstream 590 4666704 ~ 4666926 (+)
G2290523 NA non-coding upstream 21850 4645206 ~ 4645666 (+)
G2290454 NA non-coding upstream 123204 4543863 ~ 4544312 (+)
G2290425 NA non-coding upstream 159649 4507528 ~ 4507867 (+)
G2290423 NA non-coding upstream 164520 4502675 ~ 4502996 (+)
G2290576 NA non-coding downstream 5243 4672995 ~ 4673524 (+)
G2290601 NA non-coding downstream 31580 4699332 ~ 4699569 (+)
G2290615 NA non-coding downstream 39568 4707320 ~ 4707870 (+)
G2290628 NA non-coding downstream 74885 4742637 ~ 4742921 (+)
G2290638 NA non-coding downstream 80250 4748002 ~ 4748287 (+)
G2290455 NA other upstream 118672 4546904 ~ 4548844 (+)
G2290395 NA other upstream 217945 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1606737 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2286121 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2343334 2321874 ~ 2324182 (+)
G2291194 NA other downstream 749080 5416832 ~ 5418238 (+)
G2291219 NA other downstream 803811 5471563 ~ 5472153 (+)
wipf3 NA other downstream 1056572 5724270 ~ 5749736 (+)

Expression


Co-expression Network