G2290615


Basic Information

Item Value
gene id G2290615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4707320 ~ 4707870 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619567
ccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaataccccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatctgtaaatagcccatccaaatacctcattcccatattgttatttatgtgttgctcctttgcaccccagtatctctacttgcacattcatcttctgcacatctatcacttcagtgttgatgcgaaattgtaattatttcatctCTATTGcttgtttattgccttacctctctaatCTTAGTACATttg

Function

NR:

description
PREDICTED: repetitive proline-rich cell wall protein 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619567 True 551 lncRNA 0.39 1 4707320 4707870

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1525520 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1715232 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1820536 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1861754 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1907128 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 295108 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 306679 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 587939 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 801131 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 884242 5592112 ~ 5615373 (+)
G2290601 NA non-coding upstream 7751 4699332 ~ 4699569 (+)
G2290576 NA non-coding upstream 33796 4672995 ~ 4673524 (+)
G2290572 NA non-coding upstream 39568 4667516 ~ 4667752 (+)
G2290571 NA non-coding upstream 40394 4666704 ~ 4666926 (+)
G2290523 NA non-coding upstream 61654 4645206 ~ 4645666 (+)
G2290628 NA non-coding downstream 34767 4742637 ~ 4742921 (+)
G2290638 NA non-coding downstream 40132 4748002 ~ 4748287 (+)
G2290643 NA non-coding downstream 52000 4759870 ~ 4760182 (+)
G2290647 NA non-coding downstream 54006 4761876 ~ 4762377 (+)
G2290649 NA non-coding downstream 54912 4762782 ~ 4763425 (+)
G2290455 NA other upstream 158476 4546904 ~ 4548844 (+)
G2290395 NA other upstream 257749 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1646541 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2325925 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2383138 2321874 ~ 2324182 (+)
G2291194 NA other downstream 708962 5416832 ~ 5418238 (+)
G2291219 NA other downstream 763693 5471563 ~ 5472153 (+)
wipf3 NA other downstream 1016454 5724270 ~ 5749736 (+)

Expression


Co-expression Network