G2290628


Basic Information

Item Value
gene id G2290628
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4742637 ~ 4742921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619580
gtacagacaaaggtaaggtaggatgtgaatacagtggaggtaaacctaggtattgagtgatgaagagagagatattgtctctagaaacatcattgaaaccaggagatgtcattgtatgtgtgggtggtggaactaataggttggataaggtatagtgagcaggactagaggctctacagtgaaataagccaataaacactaaccagaacagcaatggacaagacatattgacattaaggagaggcatgcttagtcgagtgatcaaaagggtccagtgagtggaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619580 True 285 lncRNA 0.42 1 4742637 4742921

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1560837 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1750549 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1855853 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1897071 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1942445 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 260057 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 271628 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 552888 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 766080 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 849191 5592112 ~ 5615373 (+)
G2290615 NA non-coding upstream 34767 4707320 ~ 4707870 (+)
G2290601 NA non-coding upstream 43068 4699332 ~ 4699569 (+)
G2290576 NA non-coding upstream 69113 4672995 ~ 4673524 (+)
G2290572 NA non-coding upstream 74885 4667516 ~ 4667752 (+)
G2290571 NA non-coding upstream 75711 4666704 ~ 4666926 (+)
G2290638 NA non-coding downstream 5081 4748002 ~ 4748287 (+)
G2290643 NA non-coding downstream 16949 4759870 ~ 4760182 (+)
G2290647 NA non-coding downstream 18955 4761876 ~ 4762377 (+)
G2290649 NA non-coding downstream 19861 4762782 ~ 4763425 (+)
G2290655 NA non-coding downstream 24918 4767839 ~ 4768079 (+)
G2290455 NA other upstream 193793 4546904 ~ 4548844 (+)
G2290395 NA other upstream 293066 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1681858 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2361242 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2418455 2321874 ~ 2324182 (+)
G2291194 NA other downstream 673911 5416832 ~ 5418238 (+)
G2291219 NA other downstream 728642 5471563 ~ 5472153 (+)
wipf3 NA other downstream 981403 5724270 ~ 5749736 (+)

Expression


Co-expression Network