G2290647


Basic Information

Item Value
gene id G2290647
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4761876 ~ 4762377 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619599
gtatttgatcatgtatatgtttttgctctttattctttgttatagatccaaaaagattggagaagtggtttacccatacatctccattttggatagataattattcgtgttgttgtttgtttagtgttttccaattttcccagaagtggttagagtctatggattcttcaattgcattgagctgatttctgacatgctgttccttctttttccgtagtgtatttctgtattgttttagtgattcaccatagtgaaggcgtagactcaggttttccgggtctctatgtttttggttggacaggtttctcaatttctttcttagatttttgcattcttcatcaaaccatttgtcattattgttaattttctttggttttctatttgagatttttagatttgatagggaagctgagaggtcaaatatactgttaagattttctactgccaagtttacaccttcactattacagcggaacgttttacccaggaaattgtctaaaag

Function

NR:

description
PREDICTED: uncharacterized protein LOC109075231

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619599 True 502 lncRNA 0.34 1 4761876 4762377

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1580076 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1769788 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1875092 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1916310 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 1961684 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 240601 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 252172 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 533432 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 746624 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 829735 5592112 ~ 5615373 (+)
G2290643 NA non-coding upstream 1694 4759870 ~ 4760182 (+)
G2290638 NA non-coding upstream 13589 4748002 ~ 4748287 (+)
G2290628 NA non-coding upstream 18955 4742637 ~ 4742921 (+)
G2290615 NA non-coding upstream 54006 4707320 ~ 4707870 (+)
G2290601 NA non-coding upstream 62307 4699332 ~ 4699569 (+)
G2290649 NA non-coding downstream 405 4762782 ~ 4763425 (+)
G2290655 NA non-coding downstream 5462 4767839 ~ 4768079 (+)
G2290660 NA non-coding downstream 10374 4772751 ~ 4773762 (+)
G2290663 NA non-coding downstream 12058 4774435 ~ 4774708 (+)
G2290666 NA non-coding downstream 18838 4781215 ~ 4781425 (+)
G2290455 NA other upstream 213032 4546904 ~ 4548844 (+)
G2290395 NA other upstream 312305 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1701097 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2380481 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2437694 2321874 ~ 2324182 (+)
G2291194 NA other downstream 654455 5416832 ~ 5418238 (+)
G2291219 NA other downstream 709186 5471563 ~ 5472153 (+)
wipf3 NA other downstream 961947 5724270 ~ 5749736 (+)

Expression


Co-expression Network